AI Agent Skills

CellRank: dynamics from multi-view single-cell data

An Industrial Grade Federated Learning Framework

Cell type annotation for single-cell RNA-seq using multi-LLM consensus

An overview of algorithms for estimating pseudotime in single-cell RNA-seq data

A tool for semi-automatic cell type classification

Query the CZ CELLxGENE Census programmatically for versioned public single-cell and spatial transcriptomics data. Use when you need population-scale cell metadata, gene…

Given a gene and a single-cell atlas, compute how cell-type-specific its expression is — the tau specificity index, Sarle's expression bimodality coefficient, and the ce…

A python library for multi omics included bulk, single cell and spatial RNA-seq analysis.

Spatial Single Cell Analysis in Python

R toolkit for the analysis of single-cell chromatin data

Graph-linked unified embedding for single-cell multi-omics data integration

SRT 驱动的双后端 B-roll Agent Skill：自动路由 HyperFrames / Remotion，集成 152 张 Shotcraft 镜头卡

Multi-agent LLM driven cell type annotation for single-cell RNA-Seq data

Single-cell analysis in Python. Scales to >100M cells.

End-to-end bulk RNA-seq orchestrator — takes raw FASTQ reads through QC and trimming (FastQC, fastp/Trim Galore), alignment and quantification (STAR, Salmon, featureCoun…

Data structure for annotated matrices in single-cell analysis. Use when working with .h5ad files or integrating with the scverse ecosystem. This is the data format skill…