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Results for “cell-fate-determination

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Showing 1-16 of 20 ranked candidates matching "cell-fate-determination"

Best blend of relevance, quality, freshness, and verified outcomes

1

Cellrank

STRONG · 72TRUST · 77SAFE · REVIEWEDCODING

CellRank: dynamics from multi-view single-cell data

$ npx skills add scverse/cellrank
453 stars49 quality77 trustReviewed with permission notes2mo since pushNeeds review

Scenario GitHub automation

CLI + Codex · 4 targets

pythonbioinformatics
by scverseDetailsQuick view
2

FATE

VERIFIEDSTRONG · 72TRUST · 81SAFE · REVIEWEDDESIGN

An Industrial Grade Federated Learning Framework

$ npx skills add FederatedAI/FATE
6.1K stars53 quality81 trustReviewed with permission notes2y since pushNeeds review

Scenario Multimodal media

CLI + Codex · 4 targets

pythonmachine-learning
by FederatedAIDetailsQuick view
3

MLLMCelltype

STRONG · 73TRUST · 79SAFE · REVIEWEDCODING

Cell type annotation for single-cell RNA-seq using multi-LLM consensus

$ npx skills add cafferychen777/mLLMCelltype
646 stars50 quality79 trustReviewed with permission notes2mo since pushNeeds review

Scenario GitHub automation

CLI + Codex · 4 targets

pythonbioinformatics
by cafferychen777DetailsQuick view
4

Single Cell Pseudotime

STRONG · 78TRUST · 78SAFE · REVIEWEDCODING

An overview of algorithms for estimating pseudotime in single-cell RNA-seq data

$ npx skills add agitter/single-cell-pseudotime
444 stars52 quality78 trustReviewed26d since pushSafe to try

Scenario GitHub automation

CLI + Codex · 4 targets

bioinformatics
by agitterDetailsQuick view
5

Celltypist

STRONG · 72TRUST · 75SAFE · REVIEWEDDESIGN

A tool for semi-automatic cell type classification

$ npx skills add Teichlab/celltypist
490 stars50 quality75 trustReviewed with permission notes3mo since pushNeeds review

Scenario Multimodal media

CLI + Codex · 4 targets

pythonmachine-learning
by TeichlabDetailsQuick view
6

Omicverse

VERIFIEDEXCELLENT · 89TRUST · 87SAFE · REVIEWEDCODING

A python library for multi omics included bulk, single cell and spatial RNA-seq analysis.

$ npx skills add omicverse/omicverse
1.0K stars60 quality87 trustReviewed2mo since pushSafe to try

Scenario GitHub automation

CLI + Codex · 4 targets

pythonbioinformatics
by omicverseDetailsQuick view
7

Squidpy

STRONG · 73TRUST · 79SAFE · REVIEWEDDATA

Spatial Single Cell Analysis in Python

$ npx skills add scverse/squidpy
578 stars50 quality79 trustReviewed with permission notes2mo since pushNeeds review

Scenario Data analysis

CLI + Codex · 4 targets

pythondata-visualization
by scverseDetailsQuick view
8

Signac

PROMISING · 66TRUST · 73SAFE · REVIEWEDCODING

R toolkit for the analysis of single-cell chromatin data

$ npx skills add stuart-lab/signac
419 stars49 quality73 trustReviewed with permission notes2mo since pushNeeds review

Scenario GitHub automation

CLI + Codex · 4 targets

rbioinformatics
by stuart-labDetailsQuick view
9

GLUE

PROMISING · 60TRUST · 74SAFE · REVIEWEDCODING

Graph-linked unified embedding for single-cell multi-omics data integration

$ npx skills add gao-lab/GLUE
467 stars41 quality74 trustReviewed with permission notes7mo since pushNeeds review

Scenario GitHub automation

CLI + Codex · 4 targets

pythonbioinformatics
by gao-labDetailsQuick view
10

Erduo Broll Loop Engineering

STRONG · 71TRUST · 77SAFE · REVIEWEDDESIGN

SRT 驱动的双后端 B-roll Agent Skill:自动路由 HyperFrames / Remotion,集成 152 张 Shotcraft 镜头卡

$ npx skills add erduo1998-cell/erduo-broll-loop-engineering
71 stars48 quality77 trustReviewed with permission notesClaude Code5d since pushNeeds review

Scenario Video creation

Claude Code + CLI · 4 targets

typescript
by erduo1998-cellDetailsQuick view
11

Scgen

NEEDS REVIEW · 46TRUST · 71SAFE · EXPERIMENTALCODING

Single cell perturbation prediction

$ npx skills add theislab/scgen
351 stars37 quality71 trustExperimental2y since pushNeeds review

Scenario GitHub automation

CLI + Codex · 4 targets

pythonbioinformatics
by theislabDetailsQuick view
12

CyteType

PROMISING · 57TRUST · 72SAFE · REVIEWEDCODING

Multi-agent LLM driven cell type annotation for single-cell RNA-Seq data

$ npx skills add NygenAnalytics/CyteType
132 stars42 quality72 trustReviewed with permission notes4mo since pushNeeds review

Scenario Database and SQL

CLI + Codex · 4 targets

pythonllm
by NygenAnalyticsDetailsQuick view
13

Scanpy

VERIFIEDEXCELLENT · 93TRUST · 86SAFE · REVIEWEDCODING

Single-cell analysis in Python. Scales to >100M cells.

$ npx skills add scverse/scanpy
2.5K stars62 quality86 trustReviewed2mo since pushSafe to try

Scenario GitHub automation

CLI + Codex · 4 targets

pythonbioinformatics
by scverseDetailsQuick view
14

anndata

EXCELLENT · 92TRUST · 85SAFE · REVIEWEDDATA

Data structure for annotated matrices in single-cell analysis. Use when working with .h5ad files or integrating with the scverse ecosystem. This is the data format skill…

$ npx skills add K-Dense-AI/scientific-agent-skills --skill anndata
34.0K stars55 quality85 trustReviewedClaude Code3d since pushSafe to try

Scenario Workflow automation

Claude Code + CLI · 4 targets

by K-Dense-AIDetailsQuick view
15

arboreto

EXCELLENT · 92TRUST · 85SAFE · REVIEWEDCODING

Infer gene regulatory networks (GRNs) from gene expression data using scalable algorithms (GRNBoost2, GENIE3). Use when analyzing transcriptomics data (bulk RNA-seq, sin…

$ npx skills add K-Dense-AI/scientific-agent-skills --skill arboreto
34.0K stars55 quality85 trustReviewedClaude Code3d since pushSafe to try

Scenario GitHub automation

Claude Code + CLI · 4 targets

by K-Dense-AIDetailsQuick view
16

analytical-method-validation

EXCELLENT · 92TRUST · 75SAFE · REVIEWEDRESEARCH

Plan, execute, and document validation, verification, and transfer of analytical procedures under the governing framework - ICH Q2(R2) and Q14, USP <1220>/<1225>/<1226>,…

$ npx skills add K-Dense-AI/scientific-agent-skills --skill analytical-method-validation
34.0K stars55 quality75 trustReviewed with permission notesClaude Code3d since pushNeeds review

Scenario Research agents

Claude Code + CLI · 4 targets

by K-Dense-AIDetailsQuick view

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