AI Agent Skills

ADAM is a genomics analysis platform with specialized file formats built using Apache Avro, Apache Spark, and Apache Parquet. Apache 2 licensed.

CADAM is the open source text-to-CAD web application

🧑‍🏫 60+ Implementations/tutorials of deep learning papers with side-by-side notes 📝; including transformers (original, xl, switch, feedback, vit, ...), optimizers (ad…

Derives an ADaM Adverse Events Analysis Dataset (ADAE) using the {admiral} R package and pharmaverse ecosystem. Use when a user needs to create ADAE from SDTM AE and sup…

Derives an ADaM Subject-Level Analysis Dataset (ADSL) using the {admiral} R package and pharmaverse ecosystem. Use when a user needs to create ADSL from SDTM domains, de…

Derives ADaM Basic Data Structure (BDS) datasets using the {admiral} R package. Initial scope covers ADVS (vital signs) and ADLB (laboratory values). Use when a user nee…

Parent skill for the admiral ADaM derivation family. Covers shared conventions used across all admiral child skills: library setup, pipe style, date derivation rules, fl…

Derives an ADaM Tumor Response Analysis Dataset (ADRS) using the {admiral} and {admiralonco} R packages. Use when a user needs to create ADRS from SDTM RS domain data, d…

Derives an ADaM Time-to-Event Analysis Dataset (ADTTE) using the {admiral} R package. Use when a user needs to create ADTTE from SDTM event domains (AE, DS, CE) and ADSL…