AI Agent Skills

A python library for multi omics included bulk, single cell and spatial RNA-seq analysis.

ESB, SOA, REST, APIs and Cloud Integrations in Python

A full spaCy pipeline and models for scientific/biomedical documents.

Foldseek enables fast and sensitive comparisons of large structure sets.

A cross-platform, efficient and practical CSV/TSV toolkit in Golang

A cross-platform command-line tool for executing jobs in parallel

Scripts to download genomes from the NCBI FTP servers

ADAM is a genomics analysis platform with specialized file formats built using Apache Avro, Apache Spark, and Apache Parquet. Apache 2 licensed.

Unix, R and python tools for genomics and data science

MedRAX: Medical Reasoning Agent for Chest X-ray - ICML 2025

A comprehensive library for computational molecular biology

C library for high-throughput sequencing data formats

Pysam is a Python package for reading, manipulating, and writing genomics data such as SAM/BAM/CRAM and VCF/BCF files. It's a lightweight wrapper of the HTSlib API, the…

🐟 🍣 🍱 Highly-accurate & wicked fast transcript-level quantification from RNA-seq reads using selective alignment

Specification for the Workflow Description Language (WDL).

Plant phenotyping with image analysis