AI Agent Skills

Official git repository for Biopython (originally converted from CVS)

Conda recipes for the bioconda channel.

A versatile pairwise aligner for genomic and spliced nucleotide sequences

scikit-bio: a community-driven Python library for bioinformatics, providing versatile data structures, algorithms and educational resources.

A python library for multi omics included bulk, single cell and spatial RNA-seq analysis.

A full spaCy pipeline and models for scientific/biomedical documents.

Foldseek enables fast and sensitive comparisons of large structure sets.

Unix, R and python tools for genomics and data science

A comprehensive library for computational molecular biology

Pysam is a Python package for reading, manipulating, and writing genomics data such as SAM/BAM/CRAM and VCF/BCF files. It's a lightweight wrapper of the HTSlib API, the…

Specification for the Workflow Description Language (WDL).

Plant phenotyping with image analysis

A fast and sensitive gapped read aligner

Hifiasm: a haplotype-resolved assembler for accurate Hifi reads

An overview of algorithms for estimating pseudotime in single-cell RNA-seq data