AI Agent Skills

A Python implementation of the DESeq2 pipeline for bulk RNA-seq DEA.

rep+ — Burp-style HTTP Repeater for Chrome DevTools with built‑in AI to explain requests and suggest attacks

A python library for multi omics included bulk, single cell and spatial RNA-seq analysis.

An overview of algorithms for estimating pseudotime in single-cell RNA-seq data

197 bioinformatics & life science skills for Claude Code and AI agents — BixBench 92.0% accuracy. RNA-seq, single-cell, drug discovery, proteomics, and more. Powers Omic…

Review Java code for bugs, duplicate code, correctness risks, maintainability improvements, and missing tests. By default review files modified in git; when the user exp…

Bridge CAD, Mesh, and 3DGS representations via the SLAT unified encode-decode framework. Covers mesh↔3DGS conversion, surface extraction, CAD reverse engineering, B-rep/…

Use when the user wants Codex to turn a Markdown requirements document into a Ralph PRD and run a safe Ralph/Codex build workflow against a local Git repository. Trigger…

Predict genome-wide functional genomics tracks from DNA sequence with Borzoi (Linder 2025) — a sequence-to-function model outputting RNA-seq, CAGE, ATAC, and ChIP covera…