Cobrapy
opencobra
COBRApy is a package for constraint-based modeling of metabolic networks.
Geo ScienceSkill source unconfirmed
568GitHub
OPENAGENTSKILL / DIRECTORY
AI Agent Skills
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Candidates in this shortlist, not the full registry. GitHub stars belong to repositories, not individual skills.
Results: 151
Sourmash
sourmash-bio
Quickly search, compare, and analyze genomic and metagenomic data sets.
Geo ScienceSkill source unconfirmed
547GitHub
Anvio
merenlab
An analysis and visualization platform for 'omics data
Geo ScienceSkill source unconfirmed
526GitHub
Geojs
OpenGeoscience
High-performance visualization and interactive data exploration of scientific and geospatial location aware datasets
Geo ScienceSkill source unconfirmed
468GitHub
Py Pde
zwicker-group
Python package for solving partial differential equations using finite differences.
Geo ScienceSkill source unconfirmed
463GitHub
450GitHub
Signac
stuart-lab
R toolkit for the analysis of single-cell chromatin data
Geo ScienceSkill source unconfirmed
419GitHub
PyGenomeViz
moshi4
A genome visualization python package for comparative genomics
Geo ScienceSkill source unconfirmed
410GitHub
AllenSDK
AllenInstitute
code for reading and processing Allen Institute for Brain Science data
Geo ScienceSkill source unconfirmed
395GitHub
Mixcr
milaboratory
MiXCR is an ultimate software platform for analysis of Next-Generation Sequencing (NGS) data for immune profiling.
Geo ScienceSkill source unconfirmed
393GitHub
Atlite
PyPSA
atlite: A Lightweight Python Package for Calculating Renewable Power Potentials and Time Series
Geo ScienceSkill source unconfirmed
388GitHub
Mobile
MerginMaps
Mergin Maps mobile app ๐ฒ Open QGIS projects and manage vector data on your phone, even offline ๐ถ (Android/iOS/Windows app)
Geo ScienceSkill source unconfirmed
381GitHub
Homebrew Bio
brewsci
:beer::microscope: Bioinformatics formulae for the Homebrew package manager (macOS and Linux)
Geo ScienceSkill source unconfirmed
326GitHub
Adsb.Exposed
ClickHouse
Interactive visualization and analytics on ADS-B data with ClickHouse
Geo ScienceSkill source unconfirmed
446GitHub
Tools
nf-core
Python package with helper tools for the nf-core community.
Geo ScienceSkill source unconfirmed
312GitHub
Exactextractr
isciences
R package for fast and accurate raster zonal statistics
Geo ScienceSkill source unconfirmed
306GitHub
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