Sourmash
sourmash-bio
Quickly search, compare, and analyze genomic and metagenomic data sets.
Geo ScienceSkill source unconfirmed
547GitHub
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Results · “python-script”
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Candidates in this shortlist, not the full registry. GitHub stars belong to repositories, not individual skills.
Results: 154
Py Pde
zwicker-group
Python package for solving partial differential equations using finite differences.
Geo ScienceSkill source unconfirmed
463GitHub
Sniffles
fritzsedlazeck
Structural variation caller using third generation sequencing
Geo ScienceSkill source unconfirmed
662GitHub
459GitHub
Pdb Tools
haddocking
A dependency-free cross-platform swiss army knife for PDB files.
Geo ScienceSkill source unconfirmed
455GitHub
450GitHub
894GitHub
Geo SAM
coolzhao
A QGIS plugin tool using Segment Anything Model (SAM) to accelerate segmenting or delineating landforms in geospatial raster images.
Geo ScienceSkill source unconfirmed
413GitHub
Geocube
corteva
Tool to convert geopandas vector data into rasterized xarray data.
Geo ScienceSkill source unconfirmed
380GitHub
Srai
kraina-ai
Spatial Representations for Artificial Intelligence - a Python library toolkit for geospatial machine learning focused on creating embeddings for downstream tasks
Geo ScienceSkill source unconfirmed
378GitHub
Rapids Singlecell
scverse
rapids-singlecell: GPU-accelerated framework for scRNA analysis
Geo ScienceSkill source unconfirmed
377GitHub
Scikit Fingerprints
MLCIL
Scikit-learn compatible library for molecular fingerprints and chemoinformatics
Geo ScienceSkill source unconfirmed
377GitHub
Quackosm
kraina-ai
QuackOSM: an open-source Python and CLI tool for reading OpenStreetMap PBF files using DuckDB
Geo ScienceSkill source unconfirmed
367GitHub
Pysradb
saketkc
Package for fetching metadata and downloading data from SRA/ENA/GEO
Geo ScienceSkill source unconfirmed
364GitHub
Clouds Coder
FonaTech
Clouds Coder is a local-first coding agent platform centered on separating the CLI execution plane from the Web user plane, with Web UI, Skills Studio, resilient streami…
351GitHub
Pyfaidx
mdshw5
Efficient pythonic random access to fasta subsequences
Geo ScienceSkill source unconfirmed
486GitHub