Geopython
urschrei
Notebooks and libraries for spatial/geo Python explorations
Geo ScienceSkill source unconfirmed
375GitHub
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Results: 144
Biotite
biotite-dev
A comprehensive library for computational molecular biology
Geo ScienceSkill source unconfirmed
958GitHub
798GitHub
PyDESeq2
scverse
A Python implementation of the DESeq2 pipeline for bulk RNA-seq DEA.
Geo ScienceSkill source unconfirmed
753GitHub
752GitHub
Sourmash
sourmash-bio
Quickly search, compare, and analyze genomic and metagenomic data sets.
Geo ScienceSkill source unconfirmed
547GitHub
Cutadapt
marcelm
Cutadapt removes adapter sequences from sequencing reads
Geo ScienceSkill source unconfirmed
582GitHub
569GitHub
Clouds Coder
FonaTech
Clouds Coder is a local-first coding agent platform centered on separating the CLI execution plane from the Web user plane, with Web UI, Skills Studio, resilient streami…
351GitHub
Sniffles
fritzsedlazeck
Structural variation caller using third generation sequencing
Geo ScienceSkill source unconfirmed
662GitHub
PPanGGOLiN
labgem
Build a partitioned pangenome graph from microbial genomes
Geo ScienceSkill source unconfirmed
303GitHub
459GitHub
Pdb Tools
haddocking
A dependency-free cross-platform swiss army knife for PDB files.
Geo ScienceSkill source unconfirmed
455GitHub
450GitHub
Geo SAM
coolzhao
A QGIS plugin tool using Segment Anything Model (SAM) to accelerate segmenting or delineating landforms in geospatial raster images.
Geo ScienceSkill source unconfirmed
413GitHub
Plip
pharmai
Protein-Ligand Interaction Profiler - Analyze and visualize non-covalent protein-ligand interactions in PDB files according to 📝 Schake, Bolz, et al. (2025), https://do…
Geo ScienceSkill source unconfirmed
689GitHub