AI Agent Skills

Single-cell analysis in Python. Scales to >100M cells.

An ultra-fast all-in-one FASTQ preprocessor (QC/adapters/trimming/filtering/splitting/merging...)

MMseqs2: ultra fast and sensitive search and clustering suite

Official code repository for GATK versions 4 and up

Self-hosted platform to unify wearable health data through one AI-ready API.

Conda recipes for the bioconda channel.

Data intensive science for everyone.

A versatile pairwise aligner for genomic and spliced nucleotide sequences

Claude Code skill for improving website AEO (AI Engine Optimization) and GEO (Generative Engine Optimization) scores — 16 foundational checks, 6 intelligence dimensions,…

scikit-bio: a community-driven Python library for bioinformatics, providing versatile data structures, algorithms and educational resources.

Protein Graph Library

Scientific workflow engine designed for simplicity & scalability. Trivially transition between one off use cases to massive scale production environments

Cloud-native genomic dataframes and batch computing

A python library for multi omics included bulk, single cell and spatial RNA-seq analysis.

Foldseek enables fast and sensitive comparisons of large structure sets.

A cross-platform, efficient and practical CSV/TSV toolkit in Golang