Minimap2
lh3
A versatile pairwise aligner for genomic and spliced nucleotide sequences
Geo ScienceReview before use
2.2KGitHub
OPENAGENTSKILL / DIRECTORY
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Results · “spliced-alignment”
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Results: 6
Bwa
lh3
Burrow-Wheeler Aligner for short-read alignment (see minimap2 for long-read alignment)
Geo ScienceReview before use
1.8KGitHub
Sortmerna
sortmerna
SortMeRNA: next-generation sequence filtering and alignment tool
Geo ScienceReview before use
293GitHub
Muscle
rcedgar
Multiple sequence and structure alignment with top benchmark scores scalable to thousands of sequences. Generates replicate alignments, enabling assessment of downstream…
Geo ScienceReview before use
283GitHub
Salmon
COMBINE-lab
🐟 🍣 🍱 Highly-accurate & wicked fast transcript-level quantification from RNA-seq reads using selective alignment
Geo ScienceReview before use
893GitHub
Foldmason
steineggerlab
Multiple Protein Structure Alignment at Scale with FoldMason
Geo ScienceReview before use
280GitHub
External platform skills
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