Bwa
lh3
Burrow-Wheeler Aligner for short-read alignment (see minimap2 for long-read alignment)
Geo ScienceReview before use
1.8KGitHub
OPENAGENTSKILL / DIRECTORY
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Salmon
COMBINE-lab
🐟 🍣 🍱 Highly-accurate & wicked fast transcript-level quantification from RNA-seq reads using selective alignment
Geo ScienceReview before use
893GitHub
Seqan3
seqan
The modern C++ library for sequence analysis. Contains version 3 of the library and API docs.
Geo ScienceReview before use
456GitHub
Bismark
FelixKrueger
A tool to map bisulfite converted sequence reads and determine cytosine methylation states
Geo ScienceReview before use
450GitHub
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