Biopython
biopython
Official git repository for Biopython (originally converted from CVS)
Geo ScienceSkill source unconfirmed
5.1KGitHub
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Results: 137
Scanpy
scverse
Single-cell analysis in Python. Scales to >100M cells.
Geo ScienceSkill source unconfirmed
2.5KGitHub
PyDESeq2
scverse
A Python implementation of the DESeq2 pipeline for bulk RNA-seq DEA.
Geo ScienceSkill source unconfirmed
753GitHub
752GitHub
Nextgisweb
nextgis
NextGIS Web is an open-source Web GIS server for geospatial data management, web map publishing, and QGIS-centered collaborative workflows.
Geo ScienceSkill source unconfirmed
258GitHub
Datajoint Python
datajoint
Relational Workflows: where database schemas define executable data pipelines.
Geo ScienceSkill source unconfirmed
193GitHub
Pycsw
geopython
pycsw is an OGC CSW server implementation written in Python. pycsw fully implements the OpenGIS Catalogue Service Implementation Specification [Catalogue Service for the…
Geo ScienceSkill source unconfirmed
236GitHub
Ncbi Genome Download
kblin
Scripts to download genomes from the NCBI FTP servers
Geo ScienceSkill source unconfirmed
1.1KGitHub
5.2KGitHub
Leafmap
opengeos
A Python package for interactive mapping and geospatial analysis with minimal coding in a Jupyter environment
Geo ScienceSkill source unconfirmed
3.7KGitHub
3.1KGitHub
Geoarrow Rs
geoarrow
GeoArrow in Rust, Python, and JavaScript (WebAssembly) with vectorized geometry operations
Geo ScienceSkill source unconfirmed
411GitHub
Geopython
urschrei
Notebooks and libraries for spatial/geo Python explorations
Geo ScienceSkill source unconfirmed
375GitHub
Pyproj
pyproj4
Python interface to PROJ (cartographic projections and coordinate transformations library)
Geo ScienceSkill source unconfirmed
1.2KGitHub
Scikit Bio
scikit-bio
scikit-bio: a community-driven Python library for bioinformatics, providing versatile data structures, algorithms and educational resources.
Geo ScienceSkill source unconfirmed
1.2KGitHub
Sortmerna
sortmerna
SortMeRNA: next-generation sequence filtering and alignment tool
Geo ScienceSkill source unconfirmed
293GitHub