338GitHub
OPENAGENTSKILL / DIRECTORY
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Results · “genome-annotation”
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Results: 17
Ncbi Genome Download
kblin
Scripts to download genomes from the NCBI FTP servers
Geo ScienceReview before use
1.1KGitHub
Bakta
oschwengers
Rapid & standardized annotation of bacterial genomes, MAGs & plasmids
Geo ScienceReview before use
652GitHub
Jbrowse
GMOD
JBrowse 1, a full-featured genome browser built with JavaScript and HTML5. For JBrowse 2, see https://github.com/GMOD/jbrowse-components.
474GitHub
DRAM
WrightonLabCSU
Distilled and Refined Annotation of Metabolism: A tool for the annotation and curation of function for microbial and viral genomes
Geo ScienceReview before use
335GitHub
PyGenomeViz
moshi4
A genome visualization python package for comparative genomics
Geo ScienceReview before use
410GitHub
Jcvi
tanghaibao
Python library to facilitate genome assembly, annotation, and comparative genomics
Geo ScienceReview before use
918GitHub
MLLMCelltype
cafferychen777
Cell type annotation for single-cell RNA-seq using multi-LLM consensus
Geo ScienceReview before use
646GitHub
Sarek
nf-core
Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing
Geo ScienceReview before use
574GitHub
519GitHub
DnaFeaturesViewer
Edinburgh-Genome-Foundry
:eye: Python library to plot DNA sequence features (e.g. from Genbank files)
Geo ScienceReview before use
691GitHub
719GitHub
DnaChisel
Edinburgh-Genome-Foundry
:pencil2: A versatile DNA sequence optimizer
Geo ScienceReview before use
274GitHub
Smudgeplot
KamilSJaron
Inference of ploidy and heterozygosity structure using whole genome sequencing data
Geo ScienceReview before use
295GitHub
Snippy
tseemann
:scissors: :zap: Rapid haploid variant calling and core genome alignment
Geo ScienceReview before use
587GitHub
286GitHub
External platform skills
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