Biojava
biojava
:book::microscope::coffee: BioJava is an open-source project dedicated to providing a Java library for processing biological data.
Geo ScienceSkill source unconfirmed
622GitHub
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Results · “data-flow-analysis”
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Results: 320
MFC
MFlowCode
Exascale multiphase flow solver — 2025 Gordon Bell Prize Finalist | 200T grid points on 43K+ GPUs
Geo ScienceSkill source unconfirmed
376GitHub
459GitHub
Cellrank
scverse
CellRank: dynamics from multi-view single-cell data
Geo ScienceSkill source unconfirmed
453GitHub
Pycsw
geopython
pycsw is an OGC CSW server implementation written in Python. pycsw fully implements the OpenGIS Catalogue Service Implementation Specification [Catalogue Service for the…
Geo ScienceSkill source unconfirmed
236GitHub
Osgeo
OSGeo
The Open Source Geospatial Foundation is not-for-profit organization to empower everyone with open source geospatial. Directly supports projects as an outreach and advoc…
Geo ScienceSkill source unconfirmed
460GitHub
Megahit
voutcn
Ultra-fast and memory-efficient (meta-)genome assembler
Geo ScienceSkill source unconfirmed
719GitHub
420GitHub
Srai
kraina-ai
Spatial Representations for Artificial Intelligence - a Python library toolkit for geospatial machine learning focused on creating embeddings for downstream tasks
Geo ScienceSkill source unconfirmed
378GitHub
Rapids Singlecell
scverse
rapids-singlecell: GPU-accelerated framework for scRNA analysis
Geo ScienceSkill source unconfirmed
377GitHub
Scikit Fingerprints
MLCIL
Scikit-learn compatible library for molecular fingerprints and chemoinformatics
Geo ScienceSkill source unconfirmed
377GitHub
272GitHub
Sarek
nf-core
Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing
Geo ScienceSkill source unconfirmed
574GitHub
Freud
glotzerlab
Powerful, efficient particle trajectory analysis in scientific Python.
Geo ScienceSkill source unconfirmed
323GitHub
Marsilea
Marsilea-viz
Declarative creation of composable visualization for Python (Complex heatmap, Upset plot, Oncoprint and more~)
Geo ScienceSkill source unconfirmed
320GitHub
525GitHub