deepchem
K-Dense-AI
Molecular ML with diverse featurizers and pre-built datasets. Use for property prediction (ADMET, toxicity) with traditional ML or GNNs when you want extensive featuriza…
43.5KGitHub
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Results · “scientific-formats”
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Results: 10
bulk-rnaseq
K-Dense-AI
End-to-end bulk RNA-seq orchestrator — takes raw FASTQ reads through QC and trimming (FastQC, fastp/Trim Galore), alignment and quantification (STAR, Salmon, featureCoun…
38.5KGitHub
cobrapy
K-Dense-AI
Constraint-based metabolic modeling (COBRA). FBA, FVA, gene knockouts, flux sampling, SBML models, for systems biology and metabolic engineering analysis.
41.3KGitHub
biopython
K-Dense-AI
Comprehensive molecular biology toolkit. Use for sequence manipulation, file parsing (FASTA/GenBank/PDB), phylogenetics, and programmatic NCBI/PubMed access (Bio.Entrez)…
38.5KGitHub
bioservices
K-Dense-AI
Unified Python interface to 40+ bioinformatics services. Use when querying multiple databases (UniProt, KEGG, ChEMBL, Reactome) in a single workflow with consistent API.…
38.5KGitHub
cirq
K-Dense-AI
Google quantum computing framework. Use when targeting Google Quantum AI hardware, designing noise-aware circuits, or running quantum characterization experiments. Best…
38.5KGitHub
adaptyv
K-Dense-AI
How to use the Adaptyv Bio Foundry API and Python SDK for protein experiment design, submission, and results retrieval. Use this skill whenever the user mentions Adaptyv…
34KGitHub
nature-paper2ppt
Yuan1z0825
Build a complete Nature-style Chinese PPTX presentation from a scientific paper, preprint, PDF, article text, figure legends, or reading notes. Use for journal club, gro…
38.7KGitHub
Webgradients
itmeo
180 linear gradients in CSS3, Figma, Sketch and PSD formats — free for personal and commercial use
DesignSkill source unconfirmed
2.5KGitHub
agent-protocol
alirezarezvani
Inter-agent communication protocol for C-suite agent teams. Defines invocation syntax, loop prevention, isolation rules, and response formats. Use when C-suite agents ne…
25.1KGitHub