bulk-rnaseq
K-Dense-AI
End-to-end bulk RNA-seq orchestrator — takes raw FASTQ reads through QC and trimming (FastQC, fastp/Trim Galore), alignment and quantification (STAR, Salmon, featureCoun…
DesignClaude Code
38.5KGitHub
OPENAGENTSKILL / DIRECTORY
AI Agent Skills
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Results · “chip-seq”
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Results: 9
bio-database-evidence
foryourhealth111-pixel
Unified biological database evidence owner. Use for gene annotation, variant clinical significance, cancer mutation evidence, GWAS trait associations, pathway mapping, t…
DesignClaude Code
3.1KGitHub
EDA Q
Q-transmon-xmon
EDA-Q is a full-stack electronic design automation (EDA) tool for quantum chip design, supporting both superconducting and trapped-ion quantum computing architectures. T…
DesignReview before use
666GitHub
alterlab-borzoi
AlterLab-IEU
Predict genome-wide functional genomics tracks from DNA sequence with Borzoi (Linder 2025) — a sequence-to-function model outputting RNA-seq, CAGE, ATAC, and ChIP covera…
66GitHub
omics-plotting
jaechang-hits
omics-plotting: publication-style figure authoring for omics / bioinformatics results with matplotlib / seaborn. Read this before writing any plotting or figure code in…
DesignClaude Code
359GitHub
animated-gradient-border-ring
maxrave-dev
A rotating sweep-gradient ring around a card, chip or button, built from a clipped box, a full-size gradient and an opaque inset surface parked on its middle — where the…
DesignClaude Code
202GitHub
alterlab-arboreto
AlterLab-IEU
Infer gene regulatory networks (GRNs) from expression matrices using arboreto's scalable GRNBoost2 and GENIE3 tree-ensemble algorithms with Dask-distributed computation.…
DesignClaude Code
66GitHub
alterlab-cellxgene
AlterLab-IEU
Query the CZ CELLxGENE Census (61M+ cells) programmatically via cellxgene-census and TileDB-SOMA, slicing expression by tissue, disease, or cell type and returning AnnDa…
DesignClaude Code
66GitHub
policyengine-healthcare
PolicyEngine
US healthcare domain knowledge (Medicaid, ACA premium tax credit, CHIP, Medicare) for analysts using the policyengine package. Load for: why ACA PTC and Medicaid changes…
DesignClaude Code
32GitHub
External platform skills
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