Skill audit report
alterlab-cobrapy Audit report.
Build and analyze genome-scale constraint-based metabolic models with COBRApy — flux balance analysis (FBA), flux variability analysis (FVA), gene and reaction knockouts, flux sampling, and SBML model I/O. Use when simulating metabolic networks, predicting growth or knockout phenotypes, or running systems-biology and metabolic-engineering analyses on SBML genome-scale models. Part of the AlterLab Academic Skills suite.
OpenAgentSkill Trust Score
OpenAgentSkill Trust Score
The Trust Score helps an agent decide whether a skill is safe enough to shortlist before installation.
GitHub adoption
WARN48
66 GitHub stars
Stars/forks activity
WARN48
66 stars, 13 forks; issue activity unavailable in current metadata
Recent maintenance
PASS88
2mo since push
License clarity
PASS86
GPL-2.0
README/SKILL.md completeness
PASS86
Metadata includes enough usage and workflow context
Dependency/runtime risk
WARN46
command execution surface, external package install surface
Install availability
PASS92
npx skills add AlterLab-IEU/AlterLab-Academic-Skills --skill alterlab-cobrapy
Install command safety
PASS92
standard package or runtime install path
Permission surface
WARN50
shell or command execution, network or browser access
Repository evidence
PASS86
https://github.com/AlterLab-IEU/AlterLab-Academic-Skills/tree/main/skills/bioinformatics/alterlab-cobrapy
Review status
PASS88
AI review data available
Agent Proven outcomes
INFO54
No agent outcome data yet
Checks
Install and adoption review
Install path
92
npx skills add AlterLab-IEU/AlterLab-Academic-Skills --skill alterlab-cobrapy
Repository
88
https://github.com/AlterLab-IEU/AlterLab-Academic-Skills/tree/main/skills/bioinformatics/alterlab-cobrapy
License
86
GPL-2.0
Maintenance
88
2mo since push
AI review
88
Approved with no listed issues
README/SKILL.md completeness
86
Usable description available
Dependency risk
46
command execution surface, external package install surface
Install command safety
92
standard package or runtime install path
Permission surface
50
shell or command execution, network or browser access
Stars/forks activity
48
66 stars, 13 forks; issue activity unavailable in current metadata
Adoption
68
66 GitHub stars
Warnings
- Dependency or permission surface needs review
- Permission surface may require sandboxing
- Quality score needs review
- Permission surface needs review: shell or command execution, network or browser access
- GitHub adoption: 66 GitHub stars
- Stars/forks activity: 66 stars, 13 forks; issue activity unavailable in current metadata
- Dependency/runtime risk: command execution surface, external package install surface
- Permission surface: shell or command execution, network or browser access
Method
This report combines public metadata, AI review output, repository freshness, install readiness, OpenAgentSkill events, quality scoring, trust checks, and the agent safety gate. It is not a full source-code security review.
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