Skill audit report
Build and analyze genome-scale constraint-based metabolic models with COBRApy — flux balance analysis (FBA), flux variability analysis (FVA), gene and reaction knockouts, flux sampling, and SBML model I/O. Use when simulating metabolic networks, predicting growth or knockout phenotypes, or running systems-biology and metabolic-engineering analyses on SBML genome-scale models. Part of the AlterLab Academic Skills suite.
Skill audit report
Build and analyze genome-scale constraint-based metabolic models with COBRApy — flux balance analysis (FBA), flux variability analysis (FVA), gene and reaction knockouts, flux sampling, and SBML model I/O. Use when simulating metabolic networks, predicting growth or knockout phenotypes, or running systems-biology and metabolic-engineering analyses on SBML genome-scale models. Part of the AlterLab Academic Skills suite.
Skill audit report
Build and analyze genome-scale constraint-based metabolic models with COBRApy — flux balance analysis (FBA), flux variability analysis (FVA), gene and reaction knockouts, flux sampling, and SBML model I/O. Use when simulating metabolic networks, predicting growth or knockout phenotypes, or running systems-biology and metabolic-engineering analyses on SBML genome-scale models. Part of the AlterLab Academic Skills suite.
Skill audit report
Build and analyze genome-scale constraint-based metabolic models with COBRApy — flux balance analysis (FBA), flux variability analysis (FVA), gene and reaction knockouts, flux sampling, and SBML model I/O. Use when simulating metabolic networks, predicting growth or knockout phenotypes, or running systems-biology and metabolic-engineering analyses on SBML genome-scale models. Part of the AlterLab Academic Skills suite.
OpenAgentSkill Trust Score
The Trust Score helps an agent decide whether a skill is safe enough to shortlist before installation.
GitHub adoption
WARN48
63 GitHub stars
Stars/forks activity
WARN48
63 stars, 13 forks; issue activity unavailable in current metadata
Recent maintenance
PASS100
1d since push
License clarity
PASS86
GPL-2.0
README/SKILL.md completeness
PASS86
Metadata includes enough usage and workflow context
Dependency/runtime risk
FAIL28
command execution surface, credential or environment access
Install availability
PASS92
npx skills add AlterLab-IEU/AlterLab-Academic-Skills --skill alterlab-cobrapy
Install command safety
PASS92
standard package or runtime install path
Permission surface
FAIL24
secrets or environment access, shell or command execution
Repository evidence
PASS86
https://github.com/AlterLab-IEU/AlterLab-Academic-Skills/tree/main/skills/bioinformatics/alterlab-cobrapy
Review status
PASS88
AI review data available
Agent Proven outcomes
INFO54
No agent outcome data yet
Checks
Install path
92
npx skills add AlterLab-IEU/AlterLab-Academic-Skills --skill alterlab-cobrapy
Repository
88
https://github.com/AlterLab-IEU/AlterLab-Academic-Skills/tree/main/skills/bioinformatics/alterlab-cobrapy
License
86
GPL-2.0
Maintenance
100
1d since push
AI review
88
Approved with no listed issues
README/SKILL.md completeness
86
Usable description available
Dependency risk
28
command execution surface, credential or environment access
Install command safety
92
standard package or runtime install path
Permission surface
24
secrets or environment access, shell or command execution
Stars/forks activity
48
63 stars, 13 forks; issue activity unavailable in current metadata
Adoption
68
63 GitHub stars
Financial decision safety
58
Research-only use: do not treat output as financial advice or execute a position without human approval.
Warnings
Method
This report combines public metadata, AI review output, repository freshness, install readiness, OpenAgentSkill events, quality scoring, trust checks, and the agent safety gate. It is not a full source-code security review.
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OpenAgentSkill Trust Score
The Trust Score helps an agent decide whether a skill is safe enough to shortlist before installation.
GitHub adoption
WARN48
63 GitHub stars
Stars/forks activity
WARN48
63 stars, 13 forks; issue activity unavailable in current metadata
Recent maintenance
PASS100
1d since push
License clarity
PASS86
GPL-2.0
README/SKILL.md completeness
PASS86
Metadata includes enough usage and workflow context
Dependency/runtime risk
FAIL28
command execution surface, credential or environment access
Install availability
PASS92
npx skills add AlterLab-IEU/AlterLab-Academic-Skills --skill alterlab-cobrapy
Install command safety
PASS92
standard package or runtime install path
Permission surface
FAIL24
secrets or environment access, shell or command execution
Repository evidence
PASS86
https://github.com/AlterLab-IEU/AlterLab-Academic-Skills/tree/main/skills/bioinformatics/alterlab-cobrapy
Review status
PASS88
AI review data available
Agent Proven outcomes
INFO54
No agent outcome data yet
Checks
Install path
92
npx skills add AlterLab-IEU/AlterLab-Academic-Skills --skill alterlab-cobrapy
Repository
88
https://github.com/AlterLab-IEU/AlterLab-Academic-Skills/tree/main/skills/bioinformatics/alterlab-cobrapy
License
86
GPL-2.0
Maintenance
100
1d since push
AI review
88
Approved with no listed issues
README/SKILL.md completeness
86
Usable description available
Dependency risk
28
command execution surface, credential or environment access
Install command safety
92
standard package or runtime install path
Permission surface
24
secrets or environment access, shell or command execution
Stars/forks activity
48
63 stars, 13 forks; issue activity unavailable in current metadata
Adoption
68
63 GitHub stars
Financial decision safety
58
Research-only use: do not treat output as financial advice or execute a position without human approval.
Warnings
Method
This report combines public metadata, AI review output, repository freshness, install readiness, OpenAgentSkill events, quality scoring, trust checks, and the agent safety gate. It is not a full source-code security review.
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Turn one topic into a narrated Vox-style paper-collage explainer or ad video, from script through captions.
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OpenAgentSkill Trust Score
The Trust Score helps an agent decide whether a skill is safe enough to shortlist before installation.
GitHub adoption
WARN48
63 GitHub stars
Stars/forks activity
WARN48
63 stars, 13 forks; issue activity unavailable in current metadata
Recent maintenance
PASS100
1d since push
License clarity
PASS86
GPL-2.0
README/SKILL.md completeness
PASS86
Metadata includes enough usage and workflow context
Dependency/runtime risk
FAIL28
command execution surface, credential or environment access
Install availability
PASS92
npx skills add AlterLab-IEU/AlterLab-Academic-Skills --skill alterlab-cobrapy
Install command safety
PASS92
standard package or runtime install path
Permission surface
FAIL24
secrets or environment access, shell or command execution
Repository evidence
PASS86
https://github.com/AlterLab-IEU/AlterLab-Academic-Skills/tree/main/skills/bioinformatics/alterlab-cobrapy
Review status
PASS88
AI review data available
Agent Proven outcomes
INFO54
No agent outcome data yet
Checks
Install path
92
npx skills add AlterLab-IEU/AlterLab-Academic-Skills --skill alterlab-cobrapy
Repository
88
https://github.com/AlterLab-IEU/AlterLab-Academic-Skills/tree/main/skills/bioinformatics/alterlab-cobrapy
License
86
GPL-2.0
Maintenance
100
1d since push
AI review
88
Approved with no listed issues
README/SKILL.md completeness
86
Usable description available
Dependency risk
28
command execution surface, credential or environment access
Install command safety
92
standard package or runtime install path
Permission surface
24
secrets or environment access, shell or command execution
Stars/forks activity
48
63 stars, 13 forks; issue activity unavailable in current metadata
Adoption
68
63 GitHub stars
Financial decision safety
58
Research-only use: do not treat output as financial advice or execute a position without human approval.
Warnings
Method
This report combines public metadata, AI review output, repository freshness, install readiness, OpenAgentSkill events, quality scoring, trust checks, and the agent safety gate. It is not a full source-code security review.
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Turn one topic into a narrated Vox-style paper-collage explainer or ad video, from script through captions.
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OpenAgentSkill Trust Score
The Trust Score helps an agent decide whether a skill is safe enough to shortlist before installation.
GitHub adoption
WARN48
63 GitHub stars
Stars/forks activity
WARN48
63 stars, 13 forks; issue activity unavailable in current metadata
Recent maintenance
PASS100
1d since push
License clarity
PASS86
GPL-2.0
README/SKILL.md completeness
PASS86
Metadata includes enough usage and workflow context
Dependency/runtime risk
FAIL28
command execution surface, credential or environment access
Install availability
PASS92
npx skills add AlterLab-IEU/AlterLab-Academic-Skills --skill alterlab-cobrapy
Install command safety
PASS92
standard package or runtime install path
Permission surface
FAIL24
secrets or environment access, shell or command execution
Repository evidence
PASS86
https://github.com/AlterLab-IEU/AlterLab-Academic-Skills/tree/main/skills/bioinformatics/alterlab-cobrapy
Review status
PASS88
AI review data available
Agent Proven outcomes
INFO54
No agent outcome data yet
Checks
Install path
92
npx skills add AlterLab-IEU/AlterLab-Academic-Skills --skill alterlab-cobrapy
Repository
88
https://github.com/AlterLab-IEU/AlterLab-Academic-Skills/tree/main/skills/bioinformatics/alterlab-cobrapy
License
86
GPL-2.0
Maintenance
100
1d since push
AI review
88
Approved with no listed issues
README/SKILL.md completeness
86
Usable description available
Dependency risk
28
command execution surface, credential or environment access
Install command safety
92
standard package or runtime install path
Permission surface
24
secrets or environment access, shell or command execution
Stars/forks activity
48
63 stars, 13 forks; issue activity unavailable in current metadata
Adoption
68
63 GitHub stars
Financial decision safety
58
Research-only use: do not treat output as financial advice or execute a position without human approval.
Warnings
Method
This report combines public metadata, AI review output, repository freshness, install readiness, OpenAgentSkill events, quality scoring, trust checks, and the agent safety gate. It is not a full source-code security review.
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Turn one topic into a narrated Vox-style paper-collage explainer or ad video, from script through captions.
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