AutoRAG: An Open-Source Framework for Retrieval-Augmented Generation (RAG) Evaluation & Optimization with AutoML-Style Automation

Turn project work into reusable knowledge — an AI-agent skill for Claude Code & Codex

Data structure for annotated matrices in single-cell analysis. Use when working with .h5ad files or integrating with the scverse ecosystem. This is the data format skill—for analysis workflows use scanpy; for probabilistic models use scvi-tools; for population-scale queries use cellxgene-census.

Infer gene regulatory networks (GRNs) from gene expression data using scalable algorithms (GRNBoost2, GENIE3). Use when analyzing transcriptomics data (bulk RNA-seq, single-cell RNA-seq) to identify transcription factor-target gene relationships and regulatory interactions. Supports distributed computation for large-scale datasets.

Create branded architecture, IT current-state, flowchart, sequence, state machine, ER/data model, timeline, swimlane, quadrant, radar/spider, polar chart (polar/radial lollipop), loop/flywheel, nested, tree, org chart, layer stack, Venn, pyramid/funnel, treemap, bar, line, Gantt and scatter charts, high-level, process, medallion, data flow, DP integration, DP security matrix, Sankey, fishbone, Wardley map, kanban, user journey, deployment, dependency graph, UML class, story map, or database schema diagrams as standalone HTML/SVG/PNG. Redraw .drawio/.drawio.png/.drawio.svg or Mermaid .mmd sources at a chosen size/detail; onboard brand tokens from a website; add semantic patterns, callouts, accessible motion, or sketchy/hand-drawn styling.

AMRFinderPlus - Identify AMR genes and point mutations, and virulence and stress resistance genes in assembled bacterial nucleotide and protein sequence.

A Desktop App for Easily Viewing and Editing Markdown Files

🖊 A gtk3 markdown editor

Turn a slide mockup image into an editable PPTX: native text + semantic draggable sprites + inpainted background. Agent-as-VLM skill for Claude Code / Codex / any CLI agent.

The avant-garde Marker extraction application crafted for Final Cut Pro

Standard writing workflow in which the main Agent drafts and revises while the built-in general-purpose SubAgent reviews, balancing quality and speed.

Software package and ROS wrappers of the Aruco Augmented Reality marker detector library