Skill comparison
Compare agent skills before installing.
Comparing 4 skills
Use this as a shortlist, then open the skill detail page before adopting.
Decision summary
Minimap2 is the strongest overall pick here because it has a 100/100 readiness score and fits GitHub automation.
Strongest overall
Minimap2
Use this as a leading candidate, then validate the README and install path in your own agent stack.
Fastest prototype
Minimap2
Best first install candidate based on install readiness and adoption.
Freshest repo
MMseqs2
Most recent maintenance signal among this shortlist.
| Signal | MMseqs2 MMseqs2: ultra fast and sensitive search and clustering suite | Minimap2 A versatile pairwise aligner for genomic and spliced nucleotide sequences | Foldseek Foldseek enables fast and sensitive comparisons of large structure sets. | Hh Suite Remote protein homology detection suite. |
|---|---|---|---|---|
| Quality | 100/100 Excellent | 100/100 Excellent | 96/100 Excellent | 67/100 Promising |
| Decision verdict | 100/100 Production-ready Use this as a leading candidate, then validate the README and install path in your own agent stack. | 100/100 Production-ready Use this as a leading candidate, then validate the README and install path in your own agent stack. | 100/100 Production-ready Use this as a leading candidate, then validate the README and install path in your own agent stack. | 69/100 Prototype first Prototype with this skill first; keep a fallback candidate ready. |
| Adoption | 2.1K stars 0 installs | 2.2K stars 0 installs | 1.2K stars 0 installs | 622 stars 0 installs |
| Freshness | Jun 15, 2026 | May 19, 2026 | May 13, 2026 | Aug 12, 2025 |
| Use-case fit | ||||
| Stack fit | ||||
| Platform hints | C, Bioinformatics, Claude Code | C, Bioinformatics, Claude Code | C, Bioinformatics, Claude Code | C, Bioinformatics, Claude Code |
| Warnings | No OpenAgentSkill engagement data yet | No OpenAgentSkill engagement data yet | No OpenAgentSkill engagement data yet | No OpenAgentSkill engagement data yet |
| Best for | RAG and knowledge workflows · Claude Code teams · teams that value GitHub adoption signals | GitHub automation workflows · Claude Code teams · teams that value GitHub adoption signals | GitHub automation workflows · Claude Code teams · teams that value GitHub adoption signals | RAG and knowledge workflows · Claude Code teams · teams that value GitHub adoption signals |
| Not ideal for | teams that need a vendor-supported SLA · high-compliance environments without internal security review | teams that need a vendor-supported SLA · high-compliance environments without internal security review | teams that need a vendor-supported SLA · high-compliance environments without internal security review | teams that need a vendor-supported SLA · high-compliance environments without internal security review |
| OpenAgentSkill engagement | 0 views 0 install copies | 0 views 0 install copies | 0 views 0 install copies | 0 views 0 install copies |
| Install | $ npx skills add soedinglab/MMseqs2 | $ npx skills add lh3/minimap2 | $ npx skills add steineggerlab/foldseek | $ npx skills add soedinglab/hh-suite |