Alternatives

Cellrank alternatives for AI agents.

Compare similar skills by workflow fit, trust score, quality, GitHub adoption, maintenance, and install readiness.

Current skill

Cellrank

CellRank: dynamics from multi-view single-cell data

78
Quality
77
Trust
453
Stars
#1

Biopython

Similarity 120Trust 84Excellent 98

Official git repository for Biopython (originally converted from CVS)

5.2K starsOct 11, 2026 pushgeo-sciencePythonBioinformatics
$ npx skills add biopython/biopython
#2

ColabFold

Similarity 114Trust 84Excellent 99

Making Protein folding accessible to all!

2.8K starsJun 15, 2026 pushgeo-scienceJupyter NotebookBioinformatics
$ npx skills add sokrypton/ColabFold
#3

Cesium

Similarity 104Trust 89Excellent 100

An open-source JavaScript library for world-class 3D globes and maps :earth_americas:

15K starsJun 21, 2026 pushgeo-scienceJavaScriptGeospatial
$ npx skills add CesiumGS/cesium
#4

Turf

Similarity 103Trust 87Excellent 100

A modular geospatial engine written in JavaScript and TypeScript

10K starsJun 20, 2026 pushgeo-scienceTypeScriptGeospatial
$ npx skills add Turfjs/turf
#5

Erpnext

Similarity 103Trust 87Excellent 100

Free and Open Source Enterprise Resource Planning (ERP)

36K starsJun 16, 2026 pushgeo-sciencePythonHealth Data
$ npx skills add frappe/erpnext
#6

Tile38

Similarity 102Trust 84Excellent 99

Real-time Geospatial and Geofencing

9.7K starsJun 9, 2026 pushgeo-scienceGoGeospatial
$ npx skills add tidwall/tile38
#7

Dash

Similarity 90Trust 88Excellent 100

Data Apps & Dashboards for Python. No JavaScript Required.

24K starsJul 17, 2026 pushfinancePythonFinance
$ npx skills add plotly/dash
#8

Machine Learning For Trading

Similarity 83Trust 84Excellent 99

Code for Machine Learning for Algorithmic Trading, 2nd edition.

19K starsJun 23, 2026 pushfinanceJupyter NotebookFinance
$ npx skills add stefan-jansen/machine-learning-for-trading
#9

Gradio

Similarity 83Trust 89Excellent 100

Build and share delightful machine learning apps, all in Python. ๐ŸŒŸ Star to support our work!

43K starsJun 17, 2026 pushdata-analysisPythonData Analysis
$ npx skills add gradio-app/gradio
#10

Ray

Similarity 83Trust 89Excellent 100

Ray is an AI compute engine. Ray consists of a core distributed runtime and a set of AI Libraries for accelerating ML workloads.

43K starsJun 16, 2026 pushml-automationPythonMachine Learning
$ npx skills add ray-project/ray
#11

Pytorch Lightning

Similarity 83Trust 89Excellent 100

Pretrain, finetune ANY AI model of ANY size on 1 or 10,000+ GPUs with zero code changes.

31K starsJun 10, 2026 pushml-automationPythonMachine Learning
$ npx skills add Lightning-AI/pytorch-lightning
#12

Scikit Learn

Similarity 83Trust 87Excellent 100

scikit-learn: machine learning in Python

66K starsJun 17, 2026 pushdata-analysisPythonData Analysis
$ npx skills add scikit-learn/scikit-learn
#13

Keras

Similarity 83Trust 87Excellent 100

Deep Learning for humans

64K starsJun 12, 2026 pushml-automationPythonMachine Learning
$ npx skills add keras-team/keras
#14

Streamlit

Similarity 83Trust 87Excellent 100

Streamlit โ€” A faster way to build and share data apps.

45K starsJun 14, 2026 pushdata-analysisPythonData Analysis
$ npx skills add streamlit/streamlit
#15

SpaCy

Similarity 83Trust 87Excellent 100

๐Ÿ’ซ Industrial-strength Natural Language Processing (NLP) in Python

34K starsMay 19, 2026 pushml-automationPythonMachine Learning
$ npx skills add explosion/spaCy
#16

Recommenders

Similarity 82Trust 87Excellent 100

Best Practices on Recommendation Systems

22K starsJun 14, 2026 pushdevopsPythonKubernetes
$ npx skills add recommenders-team/recommenders

How to choose

When should you switch?

Use an alternative when it has a clearer install path, higher trust score, fresher maintenance, or better platform fit for your current agent stack. Keep Cellrank if it already passes your workflow test and repository review.

Next step

Compare top candidates side by side

Open the compare page, test the install commands in a sandbox, and check each repository before using a skill in production.