MdSilo App alternatives for AI agents.

Build your personal knowledge base with Trilium Notes

A privacy-first, open-source platform for knowledge management and collaboration. Download link: http://github.com/logseq/logseq/releases. roadmap: https://logseq.io/p/NX4mc_ggEV

Graphs that teach > graphs that impress. Turn any code into an interactive knowledge graph you can explore, search, and ask questions about. Works with Claude Code, Codex, Cursor, Copilot, Gemini CLI, and more.

A personal knowledge base that builds and maintains itself. Drop in sources — Claude (or Codex/Gemini) reads them, extracts knowledge, and maintains a persistent interlinked wiki. Works with Claude Code, Codex, OpenCode, Gemini CLI. No API key needed.

A second brain for your knowledge, thoughts, and ideas.

An out-of-the-box document retrieval workbench built on SAG

Memory layer for AI Agents. Replace complex RAG pipelines with a serverless, single-file memory layer. Give your agents instant retrieval and long-term memory.

TidGi is an privacy-in-mind, automated, auto-git-backup, freely-deployed knowledge management Desktop note app, based on Tiddlywiki, with REST API for web-clipping and Anki connect. 「 太记 」是一个基于「 太微 TiddlyWiki 」的知识管理桌面应用，能保护隐私内容、高级自动化、自动Git云备份、部署为博客，且可通过RESTAPI与Anki等应用连接。（迭代开发中欢迎试用，开发进度见下方链接）(Under active development, see website below for details)

A Simple and Universal Swarm Intelligence Engine, Predicting Anything. 简洁通用的群体智能引擎，预测万物

[EMNLP2025] "LightRAG: Simple and Fast Retrieval-Augmented Generation"

AI coding assistant skill (Claude Code, Codex, OpenCode, Cursor, Gemini CLI, and more). Turn any folder of code, SQL schemas, R scripts, shell scripts, docs, papers, images, or videos into a queryable knowledge graph. App code + database schema + infrastructure in one graph.

🕸 WebGL Graph Visualizations for React. Maintained by @goodcodeus.

high-performance graph database for real-time use cases

JSON-LD TypeScript types for Schema.org vocabulary

Athens is no longer maintainted. Athens was an open-source, collaborative knowledge graph, backed by YC W21

Self-organizing AI second brain for Obsidian + Claude Code. Drop any source and Claude reads, links, and files it into one connected knowledge graph of plain Markdown you own. AI note-taking, personal knowledge management (PKM), and an open-source Notion alternative. Based on Karpathy's LLM Wiki pattern.