{"query":"celltype-specificity-profiler","filters":{"category":null,"platform":null,"track":null,"safety":null,"include_blocked":false,"min_stars":0},"total":1,"skills":[{"rank":1,"match_type":"exact","match_score":99,"raw_match_score":1038.5,"semantic_relevance":100,"ranking_signals":{"retrieval":1012,"semantic":100,"quality":11.2,"projectPopularity":15.3,"verifiedOutcomes":0,"verifiedSource":0},"slug":"clawbio-celltype-specificity-profiler","name":"celltype-specificity-profiler","description":"Given a gene and a single-cell atlas, compute how cell-type-specific its expression is — the tau specificity index, Sarle's expression bimodality coefficient, and the cell types that drive the signal; a pure analytic transform that chains downstream of scrna-embedding.","tagline":"Given a gene and a single-cell atlas, compute how cell-type-specific its expression is — the tau specificity index, Sarle's expression bimodality coefficient, and the cell types that drive the signal; a pure analytic transform that chains downstream of scrna-embedding.","category":"research","tags":["agent-skill"],"author":{"name":"ClawBio","verified":false,"url":"https://github.com/ClawBio"},"attribution":{"status":"registry_indexed","statusLabel":"Registry indexed","shortLabel":"REGISTRY INDEXED","sourceLabel":"github candidate review","sourceDetail":"ClawBio/ClawBio","creatorName":"ClawBio","creatorUrl":"https://github.com/ClawBio","sourceUrl":"https://github.com/ClawBio/ClawBio/tree/main/skills/celltype-specificity-profiler","indexedBy":"OpenAgentSkill community index","claimUrl":"https://www.openagentskill.com/skills/clawbio-celltype-specificity-profiler#claim-this-skill","claimCta":"Claim this skill","trustNote":"This listing was indexed from public sources and is not marked official until a maintainer claim is approved.","publicNote":"Attribution links to the public repository or creator profile. Creators can claim the listing to update ownership signals."},"stats":{"stars":1125,"forks":259,"verified_installs":0,"install_attempts":0,"successful_runs":0,"total_outcomes":0,"downloads":0,"rating":0,"review_count":0,"quality_score":44.91},"quality":{"score":78,"tier":"strong","label":"Strong","summary":"Solid option that is likely worth shortlisting for production workflows.","signals":[{"label":"GitHub stars","value":"1.1K","tone":"positive"},{"label":"Freshness","value":"1d ago","tone":"positive"},{"label":"Install ready","value":"Yes","tone":"positive"},{"label":"License","value":"MIT","tone":"neutral"}],"warnings":["The `atlas` input is marked `required: false` in metadata, but the description and CLI imply it is required unless `--demo` is used. This could confuse users."]},"trust":{"version":"trust-score-v4","score":75,"tier":"strong","label":"Strong shortlist","summary":"Good trust signals with a few areas worth checking before rollout.","recommendedAction":"Test in a sandbox workflow and compare its install path with close alternatives.","dimensions":[{"id":"github_adoption","label":"GitHub adoption","score":86,"weight":0.13,"status":"pass","detail":"1.1K GitHub stars"},{"id":"repo_activity","label":"Stars/forks activity","score":83,"weight":0.08,"status":"pass","detail":"1.1K stars, 259 forks; issue activity unavailable in current metadata"},{"id":"maintenance","label":"Recent maintenance","score":100,"weight":0.14,"status":"pass","detail":"1d since push"},{"id":"license","label":"License clarity","score":86,"weight":0.09,"status":"pass","detail":"MIT"},{"id":"documentation","label":"README/SKILL.md completeness","score":52,"weight":0.14,"status":"warn","detail":"Public metadata needs stronger README/SKILL.md context"},{"id":"dependency_risk","label":"Dependency/runtime risk","score":90,"weight":0.12,"status":"pass","detail":"no major dependency risk hints in public metadata"},{"id":"installability","label":"Install availability","score":92,"weight":0.1,"status":"pass","detail":"npx skills add ClawBio/ClawBio --skill celltype-specificity-profiler"},{"id":"install_safety","label":"Install command safety","score":92,"weight":0.1,"status":"pass","detail":"standard package or runtime install path"},{"id":"permission_surface","label":"Permission surface","score":100,"weight":0.07,"status":"pass","detail":"no high-risk permission surface in public metadata"},{"id":"repository","label":"Repository evidence","score":86,"weight":0.04,"status":"pass","detail":"https://github.com/ClawBio/ClawBio/tree/main/skills/celltype-specificity-profiler"},{"id":"review_status","label":"Review status","score":66,"weight":0.05,"status":"info","detail":"AI review data available"},{"id":"agent_outcomes","label":"Agent Proven outcomes","score":54,"weight":0.13,"status":"info","detail":"No agent outcome data yet"}],"checks":[{"status":"pass","label":"GitHub adoption","detail":"1.1K GitHub stars"},{"status":"pass","label":"Stars/forks activity","detail":"1.1K stars, 259 forks; issue activity unavailable in current metadata"},{"status":"pass","label":"Recent maintenance","detail":"1d since push"},{"status":"pass","label":"License clarity","detail":"MIT"},{"status":"warn","label":"README/SKILL.md completeness","detail":"Public metadata needs stronger README/SKILL.md context"},{"status":"pass","label":"Dependency/runtime risk","detail":"no major dependency risk hints in public metadata"},{"status":"pass","label":"Install availability","detail":"npx skills add ClawBio/ClawBio --skill celltype-specificity-profiler"},{"status":"pass","label":"Install command safety","detail":"standard package or runtime install path"},{"status":"pass","label":"Permission surface","detail":"no high-risk permission surface in public metadata"},{"status":"pass","label":"Repository evidence","detail":"https://github.com/ClawBio/ClawBio/tree/main/skills/celltype-specificity-profiler"},{"status":"info","label":"Review status","detail":"AI review data available"},{"status":"info","label":"Agent Proven outcomes","detail":"No agent outcome data yet"},{"status":"warn","label":"Ownership","detail":"No approved owner claim yet"},{"status":"info","label":"OpenAgentSkill usage","detail":"No local usage activity yet"},{"status":"info","label":"Agent outcomes","detail":"No agent outcome data yet"}],"strengths":["AI review approved","Install path is available","Repository evidence is available","Recently maintained repository","Meaningful GitHub adoption signal","Install command has no obvious high-risk pattern"],"warnings":["The `atlas` input is marked `required: false` in metadata, but the description and CLI imply it is required unless `--demo` is used. This could confuse users.","Quality score needs review","Documentation summary is thin","README/SKILL.md completeness: Public metadata needs stronger README/SKILL.md context"],"evidence":{"stars":"1.1K GitHub stars","repoActivity":"1.1K stars, 259 forks","lastPushed":"1d since push","license":"MIT","repository":"https://github.com/ClawBio/ClawBio/tree/main/skills/celltype-specificity-profiler","install":"npx skills add ClawBio/ClawBio --skill celltype-specificity-profiler","installSafety":"standard package or runtime install path","permissionSurface":"no high-risk permission surface in public metadata","documentation":"Thin public metadata","agentOutcomes":"No agent outcome data yet"},"installReadiness":{"ready":true,"command":"npx skills add ClawBio/ClawBio --skill celltype-specificity-profiler","policy":"human_review_before_install","label":"Human review before install","notes":["Install path is available","Repository evidence is available","License is declared","No Agent Proven outcome evidence yet","1d since push"]},"agentCompatibility":["Codex","Claude Code","Cursor","OpenAgentSkill CLI"],"riskSummary":{"level":"medium","label":"Review before production","notes":["The `atlas` input is marked `required: false` in metadata, but the description and CLI imply it is required unless `--demo` is used. 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This could confuse users.","71/100 agent safety score"]},"auto_install_allowed":false,"human_review_required":true,"blocked":false,"audit_risk":"needs_review","permission_hints":[{"id":"network","label":"Network access","reason":"Skill likely fetches remote pages, APIs, repositories, or external services.","severity":"medium"}],"policy_warnings":["The `atlas` input is marked `required: false` in metadata, but the description and CLI imply it is required unless `--demo` is used. This could confuse users."],"constraints_applied":{"max_risk":"medium","needs_install_command":true,"min_stars":0}},"safety_gate":{"tier":"reviewed","label":"Reviewed with permission notes","badge":"REVIEWED","auto_install_policy":"review","auto_install_allowed":false,"human_review_required":true,"blocked":false,"recommended_action":"Require human approval before installing into a real workspace.","reasons":["The `atlas` input is marked `required: false` in metadata, but the description and CLI imply it is required unless `--demo` is used. 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This could confuse users.","The output description mentions an 'optional trial prior' but no input parameter for it is defined in the metadata or CLI.","Quality score needs review","Documentation summary is thin","README/SKILL.md completeness: Public metadata needs stronger README/SKILL.md context"]},"coverageTags":["Research","RAG and knowledge","agent-skill"]},"audit":{"audit_score":83,"risk_level":"needs_review","risk_label":"Needs review","warnings":["The `atlas` input is marked `required: false` in metadata, but the description and CLI imply it is required unless `--demo` is used. This could confuse users.","The output description mentions an 'optional trial prior' but no input parameter for it is defined in the metadata or CLI.","Quality score needs review","Documentation summary is thin","README/SKILL.md completeness: Public metadata needs stronger README/SKILL.md context"]},"decision":{"readiness_score":89,"readiness_label":"Production-ready","headline":"Primary pick for RAG and knowledge","role":"Primary pick","primary_fit":"RAG and knowledge","best_for":["RAG and knowledge workflows","Claude Code teams","teams that value GitHub adoption signals"],"risks":["The `atlas` input is marked `required: false` in metadata, but the description and CLI imply it is required unless `--demo` is used. This could confuse users.","No OpenAgentSkill engagement data yet"],"next_steps":["Install it in a sandbox agent and run one RAG and knowledge task end to end.","Compare output quality, latency, and failure behavior against at least one alternative.","Promote it into production only after reviewing repository permissions, license, and maintenance signals."]},"agent_readable_metadata":{"version":"openagentskill-agent-metadata-v2","skill":{"slug":"clawbio-celltype-specificity-profiler","name":"celltype-specificity-profiler","description":"Given a gene and a single-cell atlas, compute how cell-type-specific its expression is — the tau specificity index, Sarle's expression bimodality coefficient, and the cell types that drive the signal; a pure analytic transform that chains downstream of scrna-embedding.","category":"research","url":"https://www.openagentskill.com/skills/clawbio-celltype-specificity-profiler","repository":"https://github.com/ClawBio/ClawBio/tree/main/skills/celltype-specificity-profiler","github_repo":"ClawBio/ClawBio"},"suited_tasks":["RAG and knowledge workflows","Claude Code teams","teams that value GitHub adoption signals","Chunk documents","Create embeddings","Retrieve and cite relevant passages","Search sources","Extract claims"],"suited_agents":["Codex","Claude Code","Cursor","OpenAgentSkill CLI","CLI"],"install":{"command":"npx skills add ClawBio/ClawBio --skill celltype-specificity-profiler","ready":true,"targets":[{"id":"openagentskill-cli","label":"CLI","kind":"command","value":"npx --yes https://github.com/Leon-Drq/openagentskill/releases/download/cli-v0.3.0/openagentskill-0.3.0.tgz add clawbio-celltype-specificity-profiler"},{"id":"codex","label":"Codex","kind":"agent-prompt","value":"Install the \"celltype-specificity-profiler\" agent skill from https://github.com/ClawBio/ClawBio/tree/main/skills/celltype-specificity-profiler. Read its SKILL.md or equivalent instructions first, install only the files needed for this workspace, and summarize any required setup before using it. Skill purpose: Given a gene and a single-cell atlas, compute how cell-type-specific its expression is — the tau specificity index, Sarle's expression bimodality coefficient, and the cell types that drive the signal; a pure analytic transform that chains downstream of scrna-embedding. After the install attempt, report the result to https://www.openagentskill.com/api/agent/outcome with POST JSON {\"event_id\":\"install_<unique-id>\",\"skill_slug\":\"clawbio-celltype-specificity-profiler\",\"task\":\"Install celltype-specificity-profiler\",\"agent\":\"codex\",\"outcome\":\"success\",\"install_used\":true}. Replace event_id with a unique value and outcome with success or failed. Report success only after the skill is installed and a minimal verification passes."},{"id":"claude-code","label":"Claude Code","kind":"agent-prompt","value":"Add \"celltype-specificity-profiler\" as a Claude Code skill from https://github.com/ClawBio/ClawBio/tree/main/skills/celltype-specificity-profiler. Inspect the skill instructions, place the reusable skill files in the appropriate local skills location for this project, and report the activation steps. Skill purpose: Given a gene and a single-cell atlas, compute how cell-type-specific its expression is — the tau specificity index, Sarle's expression bimodality coefficient, and the cell types that drive the signal; a pure analytic transform that chains downstream of scrna-embedding. After the install attempt, report the result to https://www.openagentskill.com/api/agent/outcome with POST JSON {\"event_id\":\"install_<unique-id>\",\"skill_slug\":\"clawbio-celltype-specificity-profiler\",\"task\":\"Install celltype-specificity-profiler\",\"agent\":\"claude-code\",\"outcome\":\"success\",\"install_used\":true}. Replace event_id with a unique value and outcome with success or failed. Report success only after the skill is installed and a minimal verification passes."},{"id":"cursor","label":"Cursor","kind":"agent-prompt","value":"Turn \"celltype-specificity-profiler\" from https://github.com/ClawBio/ClawBio/tree/main/skills/celltype-specificity-profiler into a reusable Cursor project rule or agent instruction. Preserve the core workflow, adapt paths to this repo, and keep the rule scoped to tasks where it is relevant. Skill purpose: Given a gene and a single-cell atlas, compute how cell-type-specific its expression is — the tau specificity index, Sarle's expression bimodality coefficient, and the cell types that drive the signal; a pure analytic transform that chains downstream of scrna-embedding. After the install attempt, report the result to https://www.openagentskill.com/api/agent/outcome with POST JSON {\"event_id\":\"install_<unique-id>\",\"skill_slug\":\"clawbio-celltype-specificity-profiler\",\"task\":\"Install celltype-specificity-profiler\",\"agent\":\"cursor\",\"outcome\":\"success\",\"install_used\":true}. Replace event_id with a unique value and outcome with success or failed. Report success only after the skill is installed and a minimal verification passes."}],"handoff_url":"https://www.openagentskill.com/api/skills/clawbio-celltype-specificity-profiler/install","manifest_url":"https://www.openagentskill.com/api/registry/manifest/clawbio-celltype-specificity-profiler"},"trust":{"score":75,"label":"Strong shortlist","version":"trust-score-v4","install_policy":"human_review_before_install","evidence":{"stars":"1.1K GitHub stars","repoActivity":"1.1K stars, 259 forks","lastPushed":"1d since push","license":"MIT","repository":"https://github.com/ClawBio/ClawBio/tree/main/skills/celltype-specificity-profiler","install":"npx skills add ClawBio/ClawBio --skill celltype-specificity-profiler","installSafety":"standard package or runtime install path","permissionSurface":"no high-risk permission surface in public metadata","documentation":"Thin public metadata","agentOutcomes":"No agent outcome data yet"},"outcome_evidence":{"total":0,"successes":0,"failures":0,"not_relevant":0,"success_rate":null,"recent_success_rate":null,"recent_failure_rate":null,"install_attempts":0,"install_success_rate":null,"risk_blocked":0,"setup_required":0,"avg_output_quality":null,"production_outcomes":0,"last_outcome_at":null,"label":"No agent outcome data yet"},"auto_install":{"allowed":false,"sandbox_required":true,"reason":"Human review or sandbox validation is required before automatic installation."},"best_for":["research","agent-skill"],"known_risks":["The `atlas` input is marked `required: false` in metadata, but the description and CLI imply it is required unless `--demo` is used. 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Use Resolve, run one narrow sandbox task, then report the result.","metrics":{"totalOutcomes":0,"successfulOutcomes":0,"failedOutcomes":0,"installAttempts":0,"installSuccessRate":null,"successRate":null,"recentSuccessRate":null,"recentFailureRate":null,"riskBlocked":0,"setupRequired":0,"notRelevant":0,"avgOutputQuality":null,"avgTimeToUsefulMs":null,"productionOutcomes":0,"humanReviewRequired":0,"uniqueAgents":0,"lastOutcomeAt":null},"signals":[],"penalties":["No real agent outcome evidence yet"]},"audit":{"score":83,"risk_level":"needs_review","risk_label":"Needs review","warnings":["The `atlas` input is marked `required: false` in metadata, but the description and CLI imply it is required unless `--demo` is used. 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This could confuse users.","No OpenAgentSkill engagement data yet","The output description mentions an 'optional trial prior' but no input parameter for it is defined in the metadata or CLI.","Quality score needs review","Documentation summary is thin","README/SKILL.md completeness: Public metadata needs stronger README/SKILL.md context"],"agent_contract":{"task_input":"Use celltype-specificity-profiler in an agent workflow","recommended_action":"Require human approval before installing into a real workspace.","install_policy":"review","minimum_review_before_use":["Trust: 75/100 Strong shortlist","Audit: 83/100 Needs review","Safety: 71/100 Review before install","Review repository, license, install command, and permission surface before production use."],"expected_agent_output":{"selected_skill":"clawbio-celltype-specificity-profiler (celltype-specificity-profiler)","install_command":"npx skills add ClawBio/ClawBio --skill celltype-specificity-profiler","risk_summary":"Needs review; Reviewed with permission notes; Review before production","verification_result":"Report the smallest successful task, files touched, warnings, and any missing setup."}},"outcome_feedback":{"endpoint":"https://www.openagentskill.com/api/agent/outcome","method":"POST","requires_resolve_event_id":true,"event_id_source":"Use install_receipt.outcome_feedback.event_id or feedback.event_id returned by /api/agent/resolve for the current task.","expected_outcomes":["success","failed","not_relevant","blocked_by_risk","setup_required"],"payload_template":{"event_id":"<install_receipt.outcome_feedback.event_id or feedback.event_id from /api/agent/resolve>","skill_slug":"clawbio-celltype-specificity-profiler","task":"Use celltype-specificity-profiler in an agent workflow","agent":"codex","outcome":"success","install_used":true,"risk_blocked":false,"setup_required":false,"task_success":true,"output_quality":4,"error_type":null,"human_review_required":false,"workspace":"sandbox","time_to_useful_ms":120000,"notes":"Report the smallest successful task, setup friction, files touched, and risk notes."}},"endpoints":{"web":"https://www.openagentskill.com/skills/clawbio-celltype-specificity-profiler","api":"https://www.openagentskill.com/api/agent/skills/clawbio-celltype-specificity-profiler","audit":"https://www.openagentskill.com/skills/clawbio-celltype-specificity-profiler/audit","eval":"https://www.openagentskill.com/api/agent/evals?slug=clawbio-celltype-specificity-profiler&task=Use%20celltype-specificity-profiler%20in%20an%20agent%20workflow&max_risk=medium","resolve":"https://www.openagentskill.com/api/agent/resolve?task=Use%20celltype-specificity-profiler%20in%20an%20agent%20workflow&agent=codex&max_risk=medium","receipt":"https://www.openagentskill.com/api/agent/receipt?task=Use%20celltype-specificity-profiler%20in%20an%20agent%20workflow&agent=codex&max_risk=medium&format=text","install":"https://www.openagentskill.com/api/skills/clawbio-celltype-specificity-profiler/install","manifest":"https://www.openagentskill.com/api/registry/manifest/clawbio-celltype-specificity-profiler"}},"machine_metadata":{"version":"openagentskill-agent-metadata-v2","skill":{"slug":"clawbio-celltype-specificity-profiler","name":"celltype-specificity-profiler","description":"Given a gene and a single-cell atlas, compute how cell-type-specific its expression is — the tau specificity index, Sarle's expression bimodality coefficient, and the cell types that drive the signal; a pure analytic transform that chains downstream of scrna-embedding.","category":"research","url":"https://www.openagentskill.com/skills/clawbio-celltype-specificity-profiler","repository":"https://github.com/ClawBio/ClawBio/tree/main/skills/celltype-specificity-profiler","github_repo":"ClawBio/ClawBio"},"suited_tasks":["RAG and knowledge workflows","Claude Code teams","teams that value GitHub adoption signals","Chunk documents","Create embeddings","Retrieve and cite relevant passages","Search sources","Extract claims"],"suited_agents":["Codex","Claude Code","Cursor","OpenAgentSkill CLI","CLI"],"install":{"command":"npx skills add ClawBio/ClawBio --skill celltype-specificity-profiler","ready":true,"targets":[{"id":"openagentskill-cli","label":"CLI","kind":"command","value":"npx --yes https://github.com/Leon-Drq/openagentskill/releases/download/cli-v0.3.0/openagentskill-0.3.0.tgz add clawbio-celltype-specificity-profiler"},{"id":"codex","label":"Codex","kind":"agent-prompt","value":"Install the \"celltype-specificity-profiler\" agent skill from https://github.com/ClawBio/ClawBio/tree/main/skills/celltype-specificity-profiler. Read its SKILL.md or equivalent instructions first, install only the files needed for this workspace, and summarize any required setup before using it. Skill purpose: Given a gene and a single-cell atlas, compute how cell-type-specific its expression is — the tau specificity index, Sarle's expression bimodality coefficient, and the cell types that drive the signal; a pure analytic transform that chains downstream of scrna-embedding. After the install attempt, report the result to https://www.openagentskill.com/api/agent/outcome with POST JSON {\"event_id\":\"install_<unique-id>\",\"skill_slug\":\"clawbio-celltype-specificity-profiler\",\"task\":\"Install celltype-specificity-profiler\",\"agent\":\"codex\",\"outcome\":\"success\",\"install_used\":true}. Replace event_id with a unique value and outcome with success or failed. Report success only after the skill is installed and a minimal verification passes."},{"id":"claude-code","label":"Claude Code","kind":"agent-prompt","value":"Add \"celltype-specificity-profiler\" as a Claude Code skill from https://github.com/ClawBio/ClawBio/tree/main/skills/celltype-specificity-profiler. Inspect the skill instructions, place the reusable skill files in the appropriate local skills location for this project, and report the activation steps. Skill purpose: Given a gene and a single-cell atlas, compute how cell-type-specific its expression is — the tau specificity index, Sarle's expression bimodality coefficient, and the cell types that drive the signal; a pure analytic transform that chains downstream of scrna-embedding. After the install attempt, report the result to https://www.openagentskill.com/api/agent/outcome with POST JSON {\"event_id\":\"install_<unique-id>\",\"skill_slug\":\"clawbio-celltype-specificity-profiler\",\"task\":\"Install celltype-specificity-profiler\",\"agent\":\"claude-code\",\"outcome\":\"success\",\"install_used\":true}. Replace event_id with a unique value and outcome with success or failed. Report success only after the skill is installed and a minimal verification passes."},{"id":"cursor","label":"Cursor","kind":"agent-prompt","value":"Turn \"celltype-specificity-profiler\" from https://github.com/ClawBio/ClawBio/tree/main/skills/celltype-specificity-profiler into a reusable Cursor project rule or agent instruction. Preserve the core workflow, adapt paths to this repo, and keep the rule scoped to tasks where it is relevant. Skill purpose: Given a gene and a single-cell atlas, compute how cell-type-specific its expression is — the tau specificity index, Sarle's expression bimodality coefficient, and the cell types that drive the signal; a pure analytic transform that chains downstream of scrna-embedding. After the install attempt, report the result to https://www.openagentskill.com/api/agent/outcome with POST JSON {\"event_id\":\"install_<unique-id>\",\"skill_slug\":\"clawbio-celltype-specificity-profiler\",\"task\":\"Install celltype-specificity-profiler\",\"agent\":\"cursor\",\"outcome\":\"success\",\"install_used\":true}. Replace event_id with a unique value and outcome with success or failed. Report success only after the skill is installed and a minimal verification passes."}],"handoff_url":"https://www.openagentskill.com/api/skills/clawbio-celltype-specificity-profiler/install","manifest_url":"https://www.openagentskill.com/api/registry/manifest/clawbio-celltype-specificity-profiler"},"trust":{"score":75,"label":"Strong shortlist","version":"trust-score-v4","install_policy":"human_review_before_install","evidence":{"stars":"1.1K GitHub stars","repoActivity":"1.1K stars, 259 forks","lastPushed":"1d since push","license":"MIT","repository":"https://github.com/ClawBio/ClawBio/tree/main/skills/celltype-specificity-profiler","install":"npx skills add ClawBio/ClawBio --skill celltype-specificity-profiler","installSafety":"standard package or runtime install path","permissionSurface":"no high-risk permission surface in public metadata","documentation":"Thin public metadata","agentOutcomes":"No agent outcome data yet"},"outcome_evidence":{"total":0,"successes":0,"failures":0,"not_relevant":0,"success_rate":null,"recent_success_rate":null,"recent_failure_rate":null,"install_attempts":0,"install_success_rate":null,"risk_blocked":0,"setup_required":0,"avg_output_quality":null,"production_outcomes":0,"last_outcome_at":null,"label":"No agent outcome data yet"},"auto_install":{"allowed":false,"sandbox_required":true,"reason":"Human review or sandbox validation is required before automatic installation."},"best_for":["research","agent-skill"],"known_risks":["The `atlas` input is marked `required: false` in metadata, but the description and CLI imply it is required unless `--demo` is used. This could confuse users.","Quality score needs review","Documentation summary is thin","README/SKILL.md completeness: Public metadata needs stronger README/SKILL.md context"]},"agent_proven":{"version":"agent-proven-v1","score":0,"tier":"unproven","label":"Needs first agent run","summary":"No agent outcome reports yet. Use Resolve, run one narrow sandbox task, then report the result.","metrics":{"totalOutcomes":0,"successfulOutcomes":0,"failedOutcomes":0,"installAttempts":0,"installSuccessRate":null,"successRate":null,"recentSuccessRate":null,"recentFailureRate":null,"riskBlocked":0,"setupRequired":0,"notRelevant":0,"avgOutputQuality":null,"avgTimeToUsefulMs":null,"productionOutcomes":0,"humanReviewRequired":0,"uniqueAgents":0,"lastOutcomeAt":null},"signals":[],"penalties":["No real agent outcome evidence yet"]},"audit":{"score":83,"risk_level":"needs_review","risk_label":"Needs review","warnings":["The `atlas` input is marked `required: false` in metadata, but the description and CLI imply it is required unless `--demo` is used. This could confuse users.","The output description mentions an 'optional trial prior' but no input parameter for it is defined in the metadata or CLI.","Quality score needs review","Documentation summary is thin","README/SKILL.md completeness: Public metadata needs stronger README/SKILL.md context"]},"safety_gate":{"tier":"reviewed","label":"Reviewed with permission notes","auto_install_policy":"review","auto_install_allowed":false,"human_review_required":true,"blocked":false,"recommended_action":"Require human approval before installing into a real workspace."},"quality":{"score":78,"label":"Strong"},"supply":{"track":"Research and knowledge work","scenario":"RAG and knowledge","maintenance":"1d since push","risk":"Needs review"},"alternative_skills":[],"do_not_use_when":["teams that need a vendor-supported SLA","production agents without a repository review","The `atlas` input is marked `required: false` in metadata, but the description and CLI imply it is required unless `--demo` is used. This could confuse users.","No OpenAgentSkill engagement data yet","The output description mentions an 'optional trial prior' but no input parameter for it is defined in the metadata or CLI.","Quality score needs review","Documentation summary is thin","README/SKILL.md completeness: Public metadata needs stronger README/SKILL.md context"],"agent_contract":{"task_input":"Use celltype-specificity-profiler in an agent workflow","recommended_action":"Require human approval before installing into a real workspace.","install_policy":"review","minimum_review_before_use":["Trust: 75/100 Strong shortlist","Audit: 83/100 Needs review","Safety: 71/100 Review before install","Review repository, license, install command, and permission surface before production use."],"expected_agent_output":{"selected_skill":"clawbio-celltype-specificity-profiler (celltype-specificity-profiler)","install_command":"npx skills add ClawBio/ClawBio --skill celltype-specificity-profiler","risk_summary":"Needs review; Reviewed with permission notes; Review before production","verification_result":"Report the smallest successful task, files touched, warnings, and any missing setup."}},"outcome_feedback":{"endpoint":"https://www.openagentskill.com/api/agent/outcome","method":"POST","requires_resolve_event_id":true,"event_id_source":"Use install_receipt.outcome_feedback.event_id or feedback.event_id returned by /api/agent/resolve for the current task.","expected_outcomes":["success","failed","not_relevant","blocked_by_risk","setup_required"],"payload_template":{"event_id":"<install_receipt.outcome_feedback.event_id or feedback.event_id from /api/agent/resolve>","skill_slug":"clawbio-celltype-specificity-profiler","task":"Use celltype-specificity-profiler in an agent workflow","agent":"codex","outcome":"success","install_used":true,"risk_blocked":false,"setup_required":false,"task_success":true,"output_quality":4,"error_type":null,"human_review_required":false,"workspace":"sandbox","time_to_useful_ms":120000,"notes":"Report the smallest successful task, setup friction, files touched, and risk notes."}},"endpoints":{"web":"https://www.openagentskill.com/skills/clawbio-celltype-specificity-profiler","api":"https://www.openagentskill.com/api/agent/skills/clawbio-celltype-specificity-profiler","audit":"https://www.openagentskill.com/skills/clawbio-celltype-specificity-profiler/audit","eval":"https://www.openagentskill.com/api/agent/evals?slug=clawbio-celltype-specificity-profiler&task=Use%20celltype-specificity-profiler%20in%20an%20agent%20workflow&max_risk=medium","resolve":"https://www.openagentskill.com/api/agent/resolve?task=Use%20celltype-specificity-profiler%20in%20an%20agent%20workflow&agent=codex&max_risk=medium","receipt":"https://www.openagentskill.com/api/agent/receipt?task=Use%20celltype-specificity-profiler%20in%20an%20agent%20workflow&agent=codex&max_risk=medium&format=text","install":"https://www.openagentskill.com/api/skills/clawbio-celltype-specificity-profiler/install","manifest":"https://www.openagentskill.com/api/registry/manifest/clawbio-celltype-specificity-profiler"}},"platforms":["Claude Code"],"use_cases":[{"slug":"rag-knowledge","title":"RAG and knowledge","url":"https://www.openagentskill.com/use-cases/rag-knowledge"},{"slug":"research-agents","title":"Research agents","url":"https://www.openagentskill.com/use-cases/research-agents"},{"slug":"browser-automation","title":"Browser automation","url":"https://www.openagentskill.com/use-cases/browser-automation"},{"slug":"workflow-automation","title":"Workflow automation","url":"https://www.openagentskill.com/use-cases/workflow-automation"}],"install":"npx skills add ClawBio/ClawBio --skill celltype-specificity-profiler","install_targets":[{"id":"openagentskill-cli","label":"CLI","title":"OpenAgentSkill CLI","kind":"command","value":"npx --yes https://github.com/Leon-Drq/openagentskill/releases/download/cli-v0.3.0/openagentskill-0.3.0.tgz add clawbio-celltype-specificity-profiler","description":"Resolve policy, run the source installer safely, and report a verified install receipt.","copyLabel":"Copy command"},{"id":"codex","label":"Codex","title":"Codex install prompt","kind":"agent-prompt","value":"Install the \"celltype-specificity-profiler\" agent skill from https://github.com/ClawBio/ClawBio/tree/main/skills/celltype-specificity-profiler. Read its SKILL.md or equivalent instructions first, install only the files needed for this workspace, and summarize any required setup before using it. Skill purpose: Given a gene and a single-cell atlas, compute how cell-type-specific its expression is — the tau specificity index, Sarle's expression bimodality coefficient, and the cell types that drive the signal; a pure analytic transform that chains downstream of scrna-embedding. After the install attempt, report the result to https://www.openagentskill.com/api/agent/outcome with POST JSON {\"event_id\":\"install_<unique-id>\",\"skill_slug\":\"clawbio-celltype-specificity-profiler\",\"task\":\"Install celltype-specificity-profiler\",\"agent\":\"codex\",\"outcome\":\"success\",\"install_used\":true}. Replace event_id with a unique value and outcome with success or failed. Report success only after the skill is installed and a minimal verification passes.","description":"Give Codex a repo-aware install prompt when the skill is not available through a local CLI.","copyLabel":"Copy prompt"},{"id":"claude-code","label":"Claude Code","title":"Claude Code skill prompt","kind":"agent-prompt","value":"Add \"celltype-specificity-profiler\" as a Claude Code skill from https://github.com/ClawBio/ClawBio/tree/main/skills/celltype-specificity-profiler. Inspect the skill instructions, place the reusable skill files in the appropriate local skills location for this project, and report the activation steps. Skill purpose: Given a gene and a single-cell atlas, compute how cell-type-specific its expression is — the tau specificity index, Sarle's expression bimodality coefficient, and the cell types that drive the signal; a pure analytic transform that chains downstream of scrna-embedding. After the install attempt, report the result to https://www.openagentskill.com/api/agent/outcome with POST JSON {\"event_id\":\"install_<unique-id>\",\"skill_slug\":\"clawbio-celltype-specificity-profiler\",\"task\":\"Install celltype-specificity-profiler\",\"agent\":\"claude-code\",\"outcome\":\"success\",\"install_used\":true}. Replace event_id with a unique value and outcome with success or failed. Report success only after the skill is installed and a minimal verification passes.","description":"Use this prompt to ask Claude Code to add the skill and explain the local activation steps.","copyLabel":"Copy prompt"},{"id":"cursor","label":"Cursor","title":"Cursor rule prompt","kind":"agent-prompt","value":"Turn \"celltype-specificity-profiler\" from https://github.com/ClawBio/ClawBio/tree/main/skills/celltype-specificity-profiler into a reusable Cursor project rule or agent instruction. Preserve the core workflow, adapt paths to this repo, and keep the rule scoped to tasks where it is relevant. Skill purpose: Given a gene and a single-cell atlas, compute how cell-type-specific its expression is — the tau specificity index, Sarle's expression bimodality coefficient, and the cell types that drive the signal; a pure analytic transform that chains downstream of scrna-embedding. After the install attempt, report the result to https://www.openagentskill.com/api/agent/outcome with POST JSON {\"event_id\":\"install_<unique-id>\",\"skill_slug\":\"clawbio-celltype-specificity-profiler\",\"task\":\"Install celltype-specificity-profiler\",\"agent\":\"cursor\",\"outcome\":\"success\",\"install_used\":true}. Replace event_id with a unique value and outcome with success or failed. Report success only after the skill is installed and a minimal verification passes.","description":"Use this when installing as Cursor project rules or reusable agent instructions.","copyLabel":"Copy prompt"}],"repository":"https://github.com/ClawBio/ClawBio/tree/main/skills/celltype-specificity-profiler","github_repo":"ClawBio/ClawBio","version":"1.0.0","license":"MIT","updated_at":"2026-09-04T14:55:27.085393+00:00","canonical_key":"clawbio/clawbio#skills/celltype-specificity-profiler","recommendation_reasons":["Matches task terms: celltype, specificity, profiler","Useful GitHub adoption: 1,125 stars","Install handoff is available","Repository freshness signal is available","Registry match score 99"],"urls":{"web":"https://www.openagentskill.com/skills/clawbio-celltype-specificity-profiler","api":"https://www.openagentskill.com/api/agent/skills/clawbio-celltype-specificity-profiler","install_api":"https://www.openagentskill.com/api/skills/clawbio-celltype-specificity-profiler/install","audit":"https://www.openagentskill.com/skills/clawbio-celltype-specificity-profiler/audit","repository":"https://github.com/ClawBio/ClawBio/tree/main/skills/celltype-specificity-profiler"}}],"meta":{"endpoint":"/api/skills/search","canonical_agent_endpoint":"/api/agent/resolve","ranking_model":"hybrid-v2-task-fit-quality-outcomes","shortlist_policy":"Return one best match plus up to four distinct alternatives; suppress unrelated direct-name matches.","lookup_intent":true,"exact_match_found":true,"match_counts":{"exact":1,"near":0,"related":0},"no_match_message":null,"safety_policy":"Blocked candidates are excluded by default. Pass include_blocked=true only for manual audit workflows.","agent_friendly":true,"api_version":"1.0","generated_at":"2026-09-05T21:08:17.443Z"}}