{"slug":"learningmatter-mit-chem-bond-dissociation","name":"chem-bond-dissociation","description":"Calculate homolytic and heterolytic bond dissociation energies (BDEs) for all single bonds in a molecule using MLIPs with RDKit fragmentation.","tagline":"Calculate homolytic and heterolytic bond dissociation energies (BDEs) for all single bonds in a molecule using MLIPs with RDKit fragmentation.","category":"[chemistry]","tags":["agent-skill"],"author":{"name":"learningmatter-mit","verified":false,"url":"https://github.com/learningmatter-mit"},"attribution":{"status":"registry_indexed","statusLabel":"Registry indexed","shortLabel":"REGISTRY INDEXED","sourceLabel":"github candidate review","sourceDetail":"learningmatter-mit/AtomisticSkills","creatorName":"learningmatter-mit","creatorUrl":"https://github.com/learningmatter-mit","sourceUrl":"https://github.com/learningmatter-mit/AtomisticSkills/tree/main/.agents/skills/chem-bond-dissociation","indexedBy":"OpenAgentSkill community index","claimUrl":"https://www.openagentskill.com/skills/learningmatter-mit-chem-bond-dissociation#claim-this-skill","claimCta":"Claim this skill","trustNote":"This listing was indexed from public sources and is not marked official until a maintainer claim is approved.","publicNote":"Attribution links to the public repository or creator profile. Creators can claim the listing to update ownership signals."},"stats":{"stars":161,"forks":24,"verified_installs":0,"install_attempts":0,"successful_runs":0,"total_outcomes":0,"downloads":0,"rating":0,"review_count":0,"quality_score":39.02},"quality":{"score":69,"tier":"promising","label":"Promising","summary":"Useful candidate, but compare it with alternatives before adopting.","signals":[{"label":"GitHub stars","value":"161","tone":"neutral"},{"label":"Freshness","value":"5d ago","tone":"positive"},{"label":"Install ready","value":"Yes","tone":"positive"},{"label":"License","value":"MIT","tone":"neutral"}],"warnings":["No critical security issues identified; the skill runs local computations with standard scientific libraries and does not perform network operations or access sensitive resources."]},"trust":{"version":"trust-score-v4","score":67,"tier":"review","label":"Manual review","summary":"Potentially useful, but at least one trust signal needs human inspection.","recommendedAction":"Inspect the repository, license, and recent activity before connecting it to agent workflows.","dimensions":[{"id":"github_adoption","label":"GitHub adoption","score":62,"weight":0.13,"status":"info","detail":"161 GitHub stars"},{"id":"repo_activity","label":"Stars/forks activity","score":57,"weight":0.08,"status":"warn","detail":"161 stars, 24 forks; issue activity unavailable in current metadata"},{"id":"maintenance","label":"Recent maintenance","score":100,"weight":0.14,"status":"pass","detail":"5d since push"},{"id":"license","label":"License clarity","score":86,"weight":0.09,"status":"pass","detail":"MIT"},{"id":"documentation","label":"README/SKILL.md completeness","score":86,"weight":0.14,"status":"pass","detail":"Metadata includes enough usage and workflow context"},{"id":"dependency_risk","label":"Dependency/runtime risk","score":54,"weight":0.12,"status":"warn","detail":"command execution surface, credential or environment access"},{"id":"installability","label":"Install availability","score":92,"weight":0.1,"status":"pass","detail":"npx skills add learningmatter-mit/AtomisticSkills --skill chem-bond-dissociation"},{"id":"install_safety","label":"Install command safety","score":92,"weight":0.1,"status":"pass","detail":"standard package or runtime install path"},{"id":"permission_surface","label":"Permission surface","score":22,"weight":0.07,"status":"fail","detail":"secrets or environment access, shell or command execution"},{"id":"repository","label":"Repository evidence","score":86,"weight":0.04,"status":"pass","detail":"https://github.com/learningmatter-mit/AtomisticSkills/tree/main/.agents/skills/chem-bond-dissociation"},{"id":"review_status","label":"Review status","score":66,"weight":0.05,"status":"info","detail":"AI review data available"},{"id":"agent_outcomes","label":"Agent Proven outcomes","score":54,"weight":0.13,"status":"info","detail":"No agent outcome data yet"}],"checks":[{"status":"info","label":"GitHub adoption","detail":"161 GitHub stars"},{"status":"warn","label":"Stars/forks activity","detail":"161 stars, 24 forks; issue activity unavailable in current metadata"},{"status":"pass","label":"Recent maintenance","detail":"5d since push"},{"status":"pass","label":"License clarity","detail":"MIT"},{"status":"pass","label":"README/SKILL.md completeness","detail":"Metadata includes enough usage and workflow context"},{"status":"warn","label":"Dependency/runtime risk","detail":"command execution surface, credential or environment access"},{"status":"pass","label":"Install availability","detail":"npx skills add learningmatter-mit/AtomisticSkills --skill chem-bond-dissociation"},{"status":"pass","label":"Install command safety","detail":"standard package or runtime install path"},{"status":"fail","label":"Permission surface","detail":"secrets or environment access, shell or command execution"},{"status":"pass","label":"Repository evidence","detail":"https://github.com/learningmatter-mit/AtomisticSkills/tree/main/.agents/skills/chem-bond-dissociation"},{"status":"info","label":"Review status","detail":"AI review data available"},{"status":"info","label":"Agent Proven outcomes","detail":"No agent outcome data yet"},{"status":"warn","label":"Ownership","detail":"No approved owner claim yet"},{"status":"info","label":"OpenAgentSkill usage","detail":"No local usage activity yet"},{"status":"info","label":"Agent outcomes","detail":"No agent outcome data yet"}],"strengths":["AI review approved","Install path is available","Repository evidence is available","Recently maintained repository","Install command has no obvious high-risk pattern"],"warnings":["No critical security issues identified; the skill runs local computations with standard scientific libraries and does not perform network operations or access sensitive resources.","Quality score needs review","Permission surface needs review: secrets or environment access, shell or command execution","Stars/forks activity: 161 stars, 24 forks; issue activity unavailable in current metadata","Dependency/runtime risk: command execution surface, credential or environment access","Permission surface: secrets or environment access, shell or command execution"],"evidence":{"stars":"161 GitHub stars","repoActivity":"161 stars, 24 forks","lastPushed":"5d since push","license":"MIT","repository":"https://github.com/learningmatter-mit/AtomisticSkills/tree/main/.agents/skills/chem-bond-dissociation","install":"npx skills add learningmatter-mit/AtomisticSkills --skill chem-bond-dissociation","installSafety":"standard package or runtime install path","permissionSurface":"secrets or environment access, shell or command execution","documentation":"Strong README/SKILL.md context","agentOutcomes":"No agent outcome data yet"},"installReadiness":{"ready":true,"command":"npx skills add learningmatter-mit/AtomisticSkills --skill chem-bond-dissociation","policy":"human_review_before_install","label":"Human review before install","notes":["Install path is available","Repository evidence is available","License is declared","No Agent Proven outcome evidence yet","5d since push"]},"agentCompatibility":["Codex","Claude Code","Cursor","OpenAgentSkill CLI"],"riskSummary":{"level":"medium","label":"Review before production","notes":["No critical security issues identified; the skill runs local computations with standard scientific libraries and does not perform network operations or access sensitive resources.","Quality score needs review","Permission surface needs review: secrets or environment access, shell or command execution","Stars/forks activity: 161 stars, 24 forks; issue activity unavailable in current metadata","Dependency/runtime risk: command execution surface, credential or environment access"]},"outcomeEvidence":{"total":0,"successes":0,"failures":0,"notRelevant":0,"successRate":null,"installAttempts":0,"riskBlocked":0,"setupRequired":0,"installSuccessRate":null,"avgOutputQuality":null,"avgTimeToUsefulMs":null,"productionOutcomes":0,"humanReviewRequired":0,"recentSuccessRate":null,"recentFailureRate":null,"uniqueAgents":0,"agentProvenScore":0,"agentProvenLabel":"Needs first agent run","lastOutcomeAt":null,"label":"No agent outcome data yet"},"autoInstall":{"allowed":false,"sandboxRequired":true,"policy":"human_review_before_install","reason":"Human review or sandbox validation is required before automatic installation."},"bestFor":["[chemistry]","agent-skill"],"doNotUseFor":["Production credentials, payments, or irreversible account changes without explicit human review","Sensitive private data before reviewing repository code, license, and permission surface","Automatic installation in a production workspace"],"knownRisks":["No critical security issues identified; the skill runs local computations with standard scientific libraries and does not perform network operations or access sensitive resources.","Quality score needs review","Permission surface needs review: secrets or environment access, shell or command execution","Stars/forks activity: 161 stars, 24 forks; issue activity unavailable in current metadata","Dependency/runtime risk: command execution surface, credential or environment access","Permission surface: secrets or environment access, shell or command execution"]},"safety":{"score":36,"level":"avoid_auto_install","label":"Avoid automatic install","safety_tier":{"tier":"blocked","label":"Blocked for auto-install","badge":"BLOCKED","summary":"This skill should not be selected by an agent without explicit human security review.","recommended_action":"Do not auto-install. Inspect the source, dependencies, and permission surface first.","auto_install_policy":"block","reasons":["Metadata combines secrets access with shell or command execution","High-risk permission hints: Shell or command execution, Secrets or environment access"]},"auto_install_allowed":false,"human_review_required":true,"blocked":true,"audit_risk":"needs_review","permission_hints":[{"id":"shell","label":"Shell or command execution","reason":"Skill metadata references terminal, CLI, shell, subprocess, or command execution workflows.","severity":"high"},{"id":"network","label":"Network access","reason":"Skill likely fetches remote pages, APIs, repositories, or external services.","severity":"medium"},{"id":"filesystem","label":"Filesystem access","reason":"Skill may read or write project files, documents, generated artifacts, or local workspace state.","severity":"medium"},{"id":"secrets","label":"Secrets or environment access","reason":"Skill metadata references credentials, tokens, environment variables, or secret-bearing workflows.","severity":"high"}],"policy_warnings":["High-risk permission hints: Shell or command execution, Secrets or environment access","Dependency or permission surface needs review"],"constraints_applied":{"max_risk":"medium","needs_install_command":true,"min_stars":0}},"safety_gate":{"tier":"blocked","label":"Blocked for auto-install","badge":"BLOCKED","auto_install_policy":"block","auto_install_allowed":false,"human_review_required":true,"blocked":true,"recommended_action":"Do not auto-install. Inspect the source, dependencies, and permission surface first.","reasons":["Metadata combines secrets access with shell or command execution","High-risk permission hints: Shell or command execution, Secrets or environment access"]},"supply_profile":{"track":{"slug":"research","label":"Research and knowledge work","shortLabel":"Research","description":"Deep research, source comparison, literature review, RAG, knowledge search, and reports."},"scenario":{"label":"RAG and knowledge","description":"I need my agent to build a RAG workflow over documents and retrieve reliable context.","useCases":[{"slug":"rag-knowledge","title":"RAG and knowledge"},{"slug":"research-agents","title":"Research agents"},{"slug":"workflow-automation","title":"Workflow automation"}]},"applicableAgents":["Claude Code","CLI","Codex","Cursor"],"install":{"ready":true,"command":"npx skills add learningmatter-mit/AtomisticSkills --skill chem-bond-dissociation","primaryTarget":"CLI","targetCount":4},"githubQuality":{"stars":161,"starsLabel":"161","forks":24,"license":"MIT","qualityScore":69,"trustScore":67,"auditScore":76},"maintenance":{"status":"fresh","label":"5d since push","daysSincePush":5,"lastPushedAt":"2026-09-03T06:44:16+00:00"},"risk":{"level":"needs_review","label":"Needs review","requiresReview":true,"notes":["Dependency or permission surface needs review","Permission surface may require sandboxing","No critical security issues identified; the skill runs local computations with standard scientific libraries and does not perform network operations or access sensitive resources.","The SKILL.md excerpt is truncated in the review, but the provided sections are clear and comprehensive.","Quality score needs review"]},"coverageTags":["Research","RAG and knowledge","[chemistry]","agent-skill"]},"audit":{"audit_score":76,"risk_level":"needs_review","risk_label":"Needs review","warnings":["Dependency or permission surface needs review","Permission surface may require sandboxing","No critical security issues identified; the skill runs local computations with standard scientific libraries and does not perform network operations or access sensitive resources.","The SKILL.md excerpt is truncated in the review, but the provided sections are clear and comprehensive.","Quality score needs review"]},"decision":{"readiness_score":68,"readiness_label":"Prototype first","headline":"Fallback candidate for RAG and knowledge","role":"Fallback candidate","primary_fit":"RAG and knowledge","best_for":["RAG and knowledge workflows","Claude Code teams","builders willing to evaluate younger projects"],"risks":["No critical security issues identified; the skill runs local computations with standard scientific libraries and does not perform network operations or access sensitive resources.","No OpenAgentSkill engagement data yet"],"next_steps":["Install it in a sandbox agent and run one RAG and knowledge task end to end.","Compare output quality, latency, and failure behavior against at least one alternative.","Promote it into production only after reviewing repository permissions, license, and maintenance signals."]},"agent_readable_metadata":{"version":"openagentskill-agent-metadata-v2","skill":{"slug":"learningmatter-mit-chem-bond-dissociation","name":"chem-bond-dissociation","description":"Calculate homolytic and heterolytic bond dissociation energies (BDEs) for all single bonds in a molecule using MLIPs with RDKit fragmentation.","category":"[chemistry]","url":"https://www.openagentskill.com/skills/learningmatter-mit-chem-bond-dissociation","repository":"https://github.com/learningmatter-mit/AtomisticSkills/tree/main/.agents/skills/chem-bond-dissociation","github_repo":"learningmatter-mit/AtomisticSkills"},"suited_tasks":["RAG and knowledge workflows","Claude Code teams","builders willing to evaluate younger projects","Chunk documents","Create embeddings","Retrieve and cite relevant passages","Search sources","Extract claims"],"suited_agents":["Codex","Claude Code","Cursor","OpenAgentSkill CLI","CLI"],"install":{"command":"npx skills add learningmatter-mit/AtomisticSkills --skill chem-bond-dissociation","ready":true,"targets":[{"id":"openagentskill-cli","label":"CLI","kind":"command","value":"npx --yes https://github.com/Leon-Drq/openagentskill/releases/download/cli-v0.3.0/openagentskill-0.3.0.tgz add learningmatter-mit-chem-bond-dissociation"},{"id":"codex","label":"Codex","kind":"agent-prompt","value":"Install the \"chem-bond-dissociation\" agent skill from https://github.com/learningmatter-mit/AtomisticSkills/tree/main/.agents/skills/chem-bond-dissociation. Read its SKILL.md or equivalent instructions first, install only the files needed for this workspace, and summarize any required setup before using it. Skill purpose: Calculate homolytic and heterolytic bond dissociation energies (BDEs) for all single bonds in a molecule using MLIPs with RDKit fragmentation. After the install attempt, report the result to https://www.openagentskill.com/api/agent/outcome with POST JSON {\"event_id\":\"install_<unique-id>\",\"skill_slug\":\"learningmatter-mit-chem-bond-dissociation\",\"task\":\"Install chem-bond-dissociation\",\"agent\":\"codex\",\"outcome\":\"success\",\"install_used\":true}. Replace event_id with a unique value and outcome with success or failed. Report success only after the skill is installed and a minimal verification passes."},{"id":"claude-code","label":"Claude Code","kind":"agent-prompt","value":"Add \"chem-bond-dissociation\" as a Claude Code skill from https://github.com/learningmatter-mit/AtomisticSkills/tree/main/.agents/skills/chem-bond-dissociation. Inspect the skill instructions, place the reusable skill files in the appropriate local skills location for this project, and report the activation steps. Skill purpose: Calculate homolytic and heterolytic bond dissociation energies (BDEs) for all single bonds in a molecule using MLIPs with RDKit fragmentation. After the install attempt, report the result to https://www.openagentskill.com/api/agent/outcome with POST JSON {\"event_id\":\"install_<unique-id>\",\"skill_slug\":\"learningmatter-mit-chem-bond-dissociation\",\"task\":\"Install chem-bond-dissociation\",\"agent\":\"claude-code\",\"outcome\":\"success\",\"install_used\":true}. Replace event_id with a unique value and outcome with success or failed. Report success only after the skill is installed and a minimal verification passes."},{"id":"cursor","label":"Cursor","kind":"agent-prompt","value":"Turn \"chem-bond-dissociation\" from https://github.com/learningmatter-mit/AtomisticSkills/tree/main/.agents/skills/chem-bond-dissociation into a reusable Cursor project rule or agent instruction. Preserve the core workflow, adapt paths to this repo, and keep the rule scoped to tasks where it is relevant. Skill purpose: Calculate homolytic and heterolytic bond dissociation energies (BDEs) for all single bonds in a molecule using MLIPs with RDKit fragmentation. After the install attempt, report the result to https://www.openagentskill.com/api/agent/outcome with POST JSON {\"event_id\":\"install_<unique-id>\",\"skill_slug\":\"learningmatter-mit-chem-bond-dissociation\",\"task\":\"Install chem-bond-dissociation\",\"agent\":\"cursor\",\"outcome\":\"success\",\"install_used\":true}. Replace event_id with a unique value and outcome with success or failed. Report success only after the skill is installed and a minimal verification passes."}],"handoff_url":"https://www.openagentskill.com/api/skills/learningmatter-mit-chem-bond-dissociation/install","manifest_url":"https://www.openagentskill.com/api/registry/manifest/learningmatter-mit-chem-bond-dissociation"},"trust":{"score":67,"label":"Manual review","version":"trust-score-v4","install_policy":"human_review_before_install","evidence":{"stars":"161 GitHub stars","repoActivity":"161 stars, 24 forks","lastPushed":"5d since push","license":"MIT","repository":"https://github.com/learningmatter-mit/AtomisticSkills/tree/main/.agents/skills/chem-bond-dissociation","install":"npx skills add learningmatter-mit/AtomisticSkills --skill chem-bond-dissociation","installSafety":"standard package or runtime install path","permissionSurface":"secrets or environment access, shell or command execution","documentation":"Strong README/SKILL.md context","agentOutcomes":"No agent outcome data yet"},"outcome_evidence":{"total":0,"successes":0,"failures":0,"not_relevant":0,"success_rate":null,"recent_success_rate":null,"recent_failure_rate":null,"install_attempts":0,"install_success_rate":null,"risk_blocked":0,"setup_required":0,"avg_output_quality":null,"production_outcomes":0,"last_outcome_at":null,"label":"No agent outcome data yet"},"auto_install":{"allowed":false,"sandbox_required":true,"reason":"Human review or sandbox validation is required before automatic installation."},"best_for":["[chemistry]","agent-skill"],"known_risks":["No critical security issues identified; the skill runs local computations with standard scientific libraries and does not perform network operations or access sensitive resources.","Quality score needs review","Permission surface needs review: secrets or environment access, shell or command execution","Stars/forks activity: 161 stars, 24 forks; issue activity unavailable in current metadata","Dependency/runtime risk: command execution surface, credential or environment access","Permission surface: secrets or environment access, shell or command execution"]},"agent_proven":{"version":"agent-proven-v1","score":0,"tier":"unproven","label":"Needs first agent run","summary":"No agent outcome reports yet. Use Resolve, run one narrow sandbox task, then report the result.","metrics":{"totalOutcomes":0,"successfulOutcomes":0,"failedOutcomes":0,"installAttempts":0,"installSuccessRate":null,"successRate":null,"recentSuccessRate":null,"recentFailureRate":null,"riskBlocked":0,"setupRequired":0,"notRelevant":0,"avgOutputQuality":null,"avgTimeToUsefulMs":null,"productionOutcomes":0,"humanReviewRequired":0,"uniqueAgents":0,"lastOutcomeAt":null},"signals":[],"penalties":["No real agent outcome evidence yet"]},"audit":{"score":76,"risk_level":"needs_review","risk_label":"Needs review","warnings":["Dependency or permission surface needs review","Permission surface may require sandboxing","No critical security issues identified; the skill runs local computations with standard scientific libraries and does not perform network operations or access sensitive resources.","The SKILL.md excerpt is truncated in the review, but the provided sections are clear and comprehensive.","Quality score needs review","Permission surface needs review: secrets or environment access, shell or command execution","Stars/forks activity: 161 stars, 24 forks; issue activity unavailable in current metadata","Dependency/runtime risk: command execution surface, credential or environment access"]},"safety_gate":{"tier":"blocked","label":"Blocked for auto-install","auto_install_policy":"block","auto_install_allowed":false,"human_review_required":true,"blocked":true,"recommended_action":"Do not auto-install. Inspect the source, dependencies, and permission surface first."},"quality":{"score":69,"label":"Promising"},"supply":{"track":"Research and knowledge work","scenario":"RAG and knowledge","maintenance":"5d since push","risk":"Needs review"},"alternative_skills":[],"do_not_use_when":["teams that need a vendor-supported SLA","production agents without a repository review","No critical security issues identified; the skill runs local computations with standard scientific libraries and does not perform network operations or access sensitive resources.","No OpenAgentSkill engagement data yet","High-risk permission hints: Shell or command execution, Secrets or environment access","Dependency or permission surface needs review","Permission surface may require sandboxing","The SKILL.md excerpt is truncated in the review, but the provided sections are clear and comprehensive."],"agent_contract":{"task_input":"Use chem-bond-dissociation in an agent workflow","recommended_action":"Do not auto-install. Inspect the source, dependencies, and permission surface first.","install_policy":"block","minimum_review_before_use":["Trust: 67/100 Manual review","Audit: 76/100 Needs review","Safety: 36/100 Avoid automatic install","Review repository, license, install command, and permission surface before production use."],"expected_agent_output":{"selected_skill":"learningmatter-mit-chem-bond-dissociation (chem-bond-dissociation)","install_command":"npx skills add learningmatter-mit/AtomisticSkills --skill chem-bond-dissociation","risk_summary":"Needs review; Blocked for auto-install; Review before production","verification_result":"Report the smallest successful task, files touched, warnings, and any missing setup."}},"outcome_feedback":{"endpoint":"https://www.openagentskill.com/api/agent/outcome","method":"POST","requires_resolve_event_id":true,"event_id_source":"Use install_receipt.outcome_feedback.event_id or feedback.event_id returned by /api/agent/resolve for the current task.","expected_outcomes":["success","failed","not_relevant","blocked_by_risk","setup_required"],"payload_template":{"event_id":"<install_receipt.outcome_feedback.event_id or feedback.event_id from /api/agent/resolve>","skill_slug":"learningmatter-mit-chem-bond-dissociation","task":"Use chem-bond-dissociation in an agent workflow","agent":"codex","outcome":"success","install_used":true,"risk_blocked":false,"setup_required":false,"task_success":true,"output_quality":4,"error_type":null,"human_review_required":false,"workspace":"sandbox","time_to_useful_ms":120000,"notes":"Report the smallest successful task, setup friction, files touched, and risk notes."}},"endpoints":{"web":"https://www.openagentskill.com/skills/learningmatter-mit-chem-bond-dissociation","api":"https://www.openagentskill.com/api/agent/skills/learningmatter-mit-chem-bond-dissociation","audit":"https://www.openagentskill.com/skills/learningmatter-mit-chem-bond-dissociation/audit","eval":"https://www.openagentskill.com/api/agent/evals?slug=learningmatter-mit-chem-bond-dissociation&task=Use%20chem-bond-dissociation%20in%20an%20agent%20workflow&max_risk=medium","resolve":"https://www.openagentskill.com/api/agent/resolve?task=Use%20chem-bond-dissociation%20in%20an%20agent%20workflow&agent=codex&max_risk=medium","receipt":"https://www.openagentskill.com/api/agent/receipt?task=Use%20chem-bond-dissociation%20in%20an%20agent%20workflow&agent=codex&max_risk=medium&format=text","install":"https://www.openagentskill.com/api/skills/learningmatter-mit-chem-bond-dissociation/install","manifest":"https://www.openagentskill.com/api/registry/manifest/learningmatter-mit-chem-bond-dissociation"}},"machine_metadata":{"version":"openagentskill-agent-metadata-v2","skill":{"slug":"learningmatter-mit-chem-bond-dissociation","name":"chem-bond-dissociation","description":"Calculate homolytic and heterolytic bond dissociation energies (BDEs) for all single bonds in a molecule using MLIPs with RDKit fragmentation.","category":"[chemistry]","url":"https://www.openagentskill.com/skills/learningmatter-mit-chem-bond-dissociation","repository":"https://github.com/learningmatter-mit/AtomisticSkills/tree/main/.agents/skills/chem-bond-dissociation","github_repo":"learningmatter-mit/AtomisticSkills"},"suited_tasks":["RAG and knowledge workflows","Claude Code teams","builders willing to evaluate younger projects","Chunk documents","Create embeddings","Retrieve and cite relevant passages","Search sources","Extract claims"],"suited_agents":["Codex","Claude Code","Cursor","OpenAgentSkill CLI","CLI"],"install":{"command":"npx skills add learningmatter-mit/AtomisticSkills --skill chem-bond-dissociation","ready":true,"targets":[{"id":"openagentskill-cli","label":"CLI","kind":"command","value":"npx --yes https://github.com/Leon-Drq/openagentskill/releases/download/cli-v0.3.0/openagentskill-0.3.0.tgz add learningmatter-mit-chem-bond-dissociation"},{"id":"codex","label":"Codex","kind":"agent-prompt","value":"Install the \"chem-bond-dissociation\" agent skill from https://github.com/learningmatter-mit/AtomisticSkills/tree/main/.agents/skills/chem-bond-dissociation. Read its SKILL.md or equivalent instructions first, install only the files needed for this workspace, and summarize any required setup before using it. Skill purpose: Calculate homolytic and heterolytic bond dissociation energies (BDEs) for all single bonds in a molecule using MLIPs with RDKit fragmentation. After the install attempt, report the result to https://www.openagentskill.com/api/agent/outcome with POST JSON {\"event_id\":\"install_<unique-id>\",\"skill_slug\":\"learningmatter-mit-chem-bond-dissociation\",\"task\":\"Install chem-bond-dissociation\",\"agent\":\"codex\",\"outcome\":\"success\",\"install_used\":true}. Replace event_id with a unique value and outcome with success or failed. Report success only after the skill is installed and a minimal verification passes."},{"id":"claude-code","label":"Claude Code","kind":"agent-prompt","value":"Add \"chem-bond-dissociation\" as a Claude Code skill from https://github.com/learningmatter-mit/AtomisticSkills/tree/main/.agents/skills/chem-bond-dissociation. Inspect the skill instructions, place the reusable skill files in the appropriate local skills location for this project, and report the activation steps. Skill purpose: Calculate homolytic and heterolytic bond dissociation energies (BDEs) for all single bonds in a molecule using MLIPs with RDKit fragmentation. After the install attempt, report the result to https://www.openagentskill.com/api/agent/outcome with POST JSON {\"event_id\":\"install_<unique-id>\",\"skill_slug\":\"learningmatter-mit-chem-bond-dissociation\",\"task\":\"Install chem-bond-dissociation\",\"agent\":\"claude-code\",\"outcome\":\"success\",\"install_used\":true}. Replace event_id with a unique value and outcome with success or failed. Report success only after the skill is installed and a minimal verification passes."},{"id":"cursor","label":"Cursor","kind":"agent-prompt","value":"Turn \"chem-bond-dissociation\" from https://github.com/learningmatter-mit/AtomisticSkills/tree/main/.agents/skills/chem-bond-dissociation into a reusable Cursor project rule or agent instruction. Preserve the core workflow, adapt paths to this repo, and keep the rule scoped to tasks where it is relevant. Skill purpose: Calculate homolytic and heterolytic bond dissociation energies (BDEs) for all single bonds in a molecule using MLIPs with RDKit fragmentation. After the install attempt, report the result to https://www.openagentskill.com/api/agent/outcome with POST JSON {\"event_id\":\"install_<unique-id>\",\"skill_slug\":\"learningmatter-mit-chem-bond-dissociation\",\"task\":\"Install chem-bond-dissociation\",\"agent\":\"cursor\",\"outcome\":\"success\",\"install_used\":true}. Replace event_id with a unique value and outcome with success or failed. Report success only after the skill is installed and a minimal verification passes."}],"handoff_url":"https://www.openagentskill.com/api/skills/learningmatter-mit-chem-bond-dissociation/install","manifest_url":"https://www.openagentskill.com/api/registry/manifest/learningmatter-mit-chem-bond-dissociation"},"trust":{"score":67,"label":"Manual review","version":"trust-score-v4","install_policy":"human_review_before_install","evidence":{"stars":"161 GitHub stars","repoActivity":"161 stars, 24 forks","lastPushed":"5d since push","license":"MIT","repository":"https://github.com/learningmatter-mit/AtomisticSkills/tree/main/.agents/skills/chem-bond-dissociation","install":"npx skills add learningmatter-mit/AtomisticSkills --skill chem-bond-dissociation","installSafety":"standard package or runtime install path","permissionSurface":"secrets or environment access, shell or command execution","documentation":"Strong README/SKILL.md context","agentOutcomes":"No agent outcome data yet"},"outcome_evidence":{"total":0,"successes":0,"failures":0,"not_relevant":0,"success_rate":null,"recent_success_rate":null,"recent_failure_rate":null,"install_attempts":0,"install_success_rate":null,"risk_blocked":0,"setup_required":0,"avg_output_quality":null,"production_outcomes":0,"last_outcome_at":null,"label":"No agent outcome data yet"},"auto_install":{"allowed":false,"sandbox_required":true,"reason":"Human review or sandbox validation is required before automatic installation."},"best_for":["[chemistry]","agent-skill"],"known_risks":["No critical security issues identified; the skill runs local computations with standard scientific libraries and does not perform network operations or access sensitive resources.","Quality score needs review","Permission surface needs review: secrets or environment access, shell or command execution","Stars/forks activity: 161 stars, 24 forks; issue activity unavailable in current metadata","Dependency/runtime risk: command execution surface, credential or environment access","Permission surface: secrets or environment access, shell or command execution"]},"agent_proven":{"version":"agent-proven-v1","score":0,"tier":"unproven","label":"Needs first agent run","summary":"No agent outcome reports yet. Use Resolve, run one narrow sandbox task, then report the result.","metrics":{"totalOutcomes":0,"successfulOutcomes":0,"failedOutcomes":0,"installAttempts":0,"installSuccessRate":null,"successRate":null,"recentSuccessRate":null,"recentFailureRate":null,"riskBlocked":0,"setupRequired":0,"notRelevant":0,"avgOutputQuality":null,"avgTimeToUsefulMs":null,"productionOutcomes":0,"humanReviewRequired":0,"uniqueAgents":0,"lastOutcomeAt":null},"signals":[],"penalties":["No real agent outcome evidence yet"]},"audit":{"score":76,"risk_level":"needs_review","risk_label":"Needs review","warnings":["Dependency or permission surface needs review","Permission surface may require sandboxing","No critical security issues identified; the skill runs local computations with standard scientific libraries and does not perform network operations or access sensitive resources.","The SKILL.md excerpt is truncated in the review, but the provided sections are clear and comprehensive.","Quality score needs review","Permission surface needs review: secrets or environment access, shell or command execution","Stars/forks activity: 161 stars, 24 forks; issue activity unavailable in current metadata","Dependency/runtime risk: command execution surface, credential or environment access"]},"safety_gate":{"tier":"blocked","label":"Blocked for auto-install","auto_install_policy":"block","auto_install_allowed":false,"human_review_required":true,"blocked":true,"recommended_action":"Do not auto-install. Inspect the source, dependencies, and permission surface first."},"quality":{"score":69,"label":"Promising"},"supply":{"track":"Research and knowledge work","scenario":"RAG and knowledge","maintenance":"5d since push","risk":"Needs review"},"alternative_skills":[],"do_not_use_when":["teams that need a vendor-supported SLA","production agents without a repository review","No critical security issues identified; the skill runs local computations with standard scientific libraries and does not perform network operations or access sensitive resources.","No OpenAgentSkill engagement data yet","High-risk permission hints: Shell or command execution, Secrets or environment access","Dependency or permission surface needs review","Permission surface may require sandboxing","The SKILL.md excerpt is truncated in the review, but the provided sections are clear and comprehensive."],"agent_contract":{"task_input":"Use chem-bond-dissociation in an agent workflow","recommended_action":"Do not auto-install. Inspect the source, dependencies, and permission surface first.","install_policy":"block","minimum_review_before_use":["Trust: 67/100 Manual review","Audit: 76/100 Needs review","Safety: 36/100 Avoid automatic install","Review repository, license, install command, and permission surface before production use."],"expected_agent_output":{"selected_skill":"learningmatter-mit-chem-bond-dissociation (chem-bond-dissociation)","install_command":"npx skills add learningmatter-mit/AtomisticSkills --skill chem-bond-dissociation","risk_summary":"Needs review; Blocked for auto-install; Review before production","verification_result":"Report the smallest successful task, files touched, warnings, and any missing setup."}},"outcome_feedback":{"endpoint":"https://www.openagentskill.com/api/agent/outcome","method":"POST","requires_resolve_event_id":true,"event_id_source":"Use install_receipt.outcome_feedback.event_id or feedback.event_id returned by /api/agent/resolve for the current task.","expected_outcomes":["success","failed","not_relevant","blocked_by_risk","setup_required"],"payload_template":{"event_id":"<install_receipt.outcome_feedback.event_id or feedback.event_id from /api/agent/resolve>","skill_slug":"learningmatter-mit-chem-bond-dissociation","task":"Use chem-bond-dissociation in an agent workflow","agent":"codex","outcome":"success","install_used":true,"risk_blocked":false,"setup_required":false,"task_success":true,"output_quality":4,"error_type":null,"human_review_required":false,"workspace":"sandbox","time_to_useful_ms":120000,"notes":"Report the smallest successful task, setup friction, files touched, and risk notes."}},"endpoints":{"web":"https://www.openagentskill.com/skills/learningmatter-mit-chem-bond-dissociation","api":"https://www.openagentskill.com/api/agent/skills/learningmatter-mit-chem-bond-dissociation","audit":"https://www.openagentskill.com/skills/learningmatter-mit-chem-bond-dissociation/audit","eval":"https://www.openagentskill.com/api/agent/evals?slug=learningmatter-mit-chem-bond-dissociation&task=Use%20chem-bond-dissociation%20in%20an%20agent%20workflow&max_risk=medium","resolve":"https://www.openagentskill.com/api/agent/resolve?task=Use%20chem-bond-dissociation%20in%20an%20agent%20workflow&agent=codex&max_risk=medium","receipt":"https://www.openagentskill.com/api/agent/receipt?task=Use%20chem-bond-dissociation%20in%20an%20agent%20workflow&agent=codex&max_risk=medium&format=text","install":"https://www.openagentskill.com/api/skills/learningmatter-mit-chem-bond-dissociation/install","manifest":"https://www.openagentskill.com/api/registry/manifest/learningmatter-mit-chem-bond-dissociation"}},"platforms":["Claude Code"],"use_cases":[{"slug":"rag-knowledge","title":"RAG and knowledge","url":"https://www.openagentskill.com/use-cases/rag-knowledge"},{"slug":"research-agents","title":"Research agents","url":"https://www.openagentskill.com/use-cases/research-agents"},{"slug":"workflow-automation","title":"Workflow automation","url":"https://www.openagentskill.com/use-cases/workflow-automation"},{"slug":"github-automation","title":"GitHub automation","url":"https://www.openagentskill.com/use-cases/github-automation"}],"install":"npx skills add learningmatter-mit/AtomisticSkills --skill chem-bond-dissociation","install_targets":[{"id":"openagentskill-cli","label":"CLI","title":"OpenAgentSkill CLI","kind":"command","value":"npx --yes https://github.com/Leon-Drq/openagentskill/releases/download/cli-v0.3.0/openagentskill-0.3.0.tgz add learningmatter-mit-chem-bond-dissociation","description":"Resolve policy, run the source installer safely, and report a verified install receipt.","copyLabel":"Copy command"},{"id":"codex","label":"Codex","title":"Codex install prompt","kind":"agent-prompt","value":"Install the \"chem-bond-dissociation\" agent skill from https://github.com/learningmatter-mit/AtomisticSkills/tree/main/.agents/skills/chem-bond-dissociation. Read its SKILL.md or equivalent instructions first, install only the files needed for this workspace, and summarize any required setup before using it. Skill purpose: Calculate homolytic and heterolytic bond dissociation energies (BDEs) for all single bonds in a molecule using MLIPs with RDKit fragmentation. After the install attempt, report the result to https://www.openagentskill.com/api/agent/outcome with POST JSON {\"event_id\":\"install_<unique-id>\",\"skill_slug\":\"learningmatter-mit-chem-bond-dissociation\",\"task\":\"Install chem-bond-dissociation\",\"agent\":\"codex\",\"outcome\":\"success\",\"install_used\":true}. Replace event_id with a unique value and outcome with success or failed. Report success only after the skill is installed and a minimal verification passes.","description":"Give Codex a repo-aware install prompt when the skill is not available through a local CLI.","copyLabel":"Copy prompt"},{"id":"claude-code","label":"Claude Code","title":"Claude Code skill prompt","kind":"agent-prompt","value":"Add \"chem-bond-dissociation\" as a Claude Code skill from https://github.com/learningmatter-mit/AtomisticSkills/tree/main/.agents/skills/chem-bond-dissociation. Inspect the skill instructions, place the reusable skill files in the appropriate local skills location for this project, and report the activation steps. Skill purpose: Calculate homolytic and heterolytic bond dissociation energies (BDEs) for all single bonds in a molecule using MLIPs with RDKit fragmentation. After the install attempt, report the result to https://www.openagentskill.com/api/agent/outcome with POST JSON {\"event_id\":\"install_<unique-id>\",\"skill_slug\":\"learningmatter-mit-chem-bond-dissociation\",\"task\":\"Install chem-bond-dissociation\",\"agent\":\"claude-code\",\"outcome\":\"success\",\"install_used\":true}. Replace event_id with a unique value and outcome with success or failed. Report success only after the skill is installed and a minimal verification passes.","description":"Use this prompt to ask Claude Code to add the skill and explain the local activation steps.","copyLabel":"Copy prompt"},{"id":"cursor","label":"Cursor","title":"Cursor rule prompt","kind":"agent-prompt","value":"Turn \"chem-bond-dissociation\" from https://github.com/learningmatter-mit/AtomisticSkills/tree/main/.agents/skills/chem-bond-dissociation into a reusable Cursor project rule or agent instruction. Preserve the core workflow, adapt paths to this repo, and keep the rule scoped to tasks where it is relevant. Skill purpose: Calculate homolytic and heterolytic bond dissociation energies (BDEs) for all single bonds in a molecule using MLIPs with RDKit fragmentation. After the install attempt, report the result to https://www.openagentskill.com/api/agent/outcome with POST JSON {\"event_id\":\"install_<unique-id>\",\"skill_slug\":\"learningmatter-mit-chem-bond-dissociation\",\"task\":\"Install chem-bond-dissociation\",\"agent\":\"cursor\",\"outcome\":\"success\",\"install_used\":true}. Replace event_id with a unique value and outcome with success or failed. Report success only after the skill is installed and a minimal verification passes.","description":"Use this when installing as Cursor project rules or reusable agent instructions.","copyLabel":"Copy prompt"}],"repository":"https://github.com/learningmatter-mit/AtomisticSkills/tree/main/.agents/skills/chem-bond-dissociation","github_repo":"learningmatter-mit/AtomisticSkills","version":"1.0.0","license":"MIT","updated_at":"2026-09-06T11:41:43.468559+00:00","canonical_key":"learningmatter-mit/atomisticskills#.agents/skills/chem-bond-dissociation","recommendation_reasons":["Install handoff is available","Repository freshness signal is available"],"urls":{"web":"https://www.openagentskill.com/skills/learningmatter-mit-chem-bond-dissociation","api":"https://www.openagentskill.com/api/agent/skills/learningmatter-mit-chem-bond-dissociation","install_api":"https://www.openagentskill.com/api/skills/learningmatter-mit-chem-bond-dissociation/install","audit":"https://www.openagentskill.com/skills/learningmatter-mit-chem-bond-dissociation/audit","repository":"https://github.com/learningmatter-mit/AtomisticSkills/tree/main/.agents/skills/chem-bond-dissociation"},"meta":{"endpoint":"/api/registry/manifest/{slug}","canonical_agent_endpoint":"/api/agent/skills/learningmatter-mit-chem-bond-dissociation","agent_friendly":true,"api_version":"1.0","generated_at":"2026-09-08T07:01:42.901Z"}}