{"eval":{"version":"openagentskill-skill-eval-v1","slug":"clawbio-affinity-proteomics","name":"affinity-proteomics","generated_at":"2026-08-23T20:30:01.124Z","task_input":"Evaluate affinity-proteomics before installing it in an AI agent workflow","status":"failed","score":72,"risk_level":"high","decision":{"recommendation":"do_not_auto_install","reason":"Permission surface: shell or command execution, filesystem or document access","auto_install_allowed":false,"policy":"block","human_review_required":true},"task_fit":{"score":84,"suited_tasks":["Research agents workflows","Claude Code teams","teams that value GitHub adoption signals","Search sources","Extract claims","Synthesize findings","Move data between tools","Transform files"],"suited_agents":["Codex","Claude Code","Cursor","OpenAgentSkill CLI","CLI"]},"install":{"command":"npx skills add ClawBio/ClawBio --skill affinity-proteomics","ready":true,"policy":"review","safety_label":"Avoid automatic install","targets":[{"id":"openagentskill-cli","label":"CLI","kind":"command","value":"npx --yes https://github.com/Leon-Drq/openagentskill/releases/download/cli-v0.2.1/openagentskill-0.2.1.tgz install clawbio-affinity-proteomics"},{"id":"codex","label":"Codex","kind":"agent-prompt","value":"Install the \"affinity-proteomics\" agent skill from https://github.com/ClawBio/ClawBio/tree/main/skills/affinity-proteomics. Read its SKILL.md or equivalent instructions first, install only the files needed for this workspace, and summarize any required setup before using it. Skill purpose: Unified analysis pipeline for affinity-based proteomics platforms — Olink (PEA, NPX) and SomaLogic SomaScan (SOMAmer, After the install attempt, report the result to https://www.openagentskill.com/api/agent/outcome with POST JSON {\"event_id\":\"install_<unique-id>\",\"skill_slug\":\"clawbio-affinity-proteomics\",\"task\":\"Install affinity-proteomics\",\"agent\":\"codex\",\"outcome\":\"success\",\"install_used\":true}. Replace event_id with a unique value and outcome with success or failed. Report success only after the skill is installed and a minimal verification passes."},{"id":"claude-code","label":"Claude Code","kind":"agent-prompt","value":"Add \"affinity-proteomics\" as a Claude Code skill from https://github.com/ClawBio/ClawBio/tree/main/skills/affinity-proteomics. Inspect the skill instructions, place the reusable skill files in the appropriate local skills location for this project, and report the activation steps. Skill purpose: Unified analysis pipeline for affinity-based proteomics platforms — Olink (PEA, NPX) and SomaLogic SomaScan (SOMAmer, After the install attempt, report the result to https://www.openagentskill.com/api/agent/outcome with POST JSON {\"event_id\":\"install_<unique-id>\",\"skill_slug\":\"clawbio-affinity-proteomics\",\"task\":\"Install affinity-proteomics\",\"agent\":\"claude-code\",\"outcome\":\"success\",\"install_used\":true}. Replace event_id with a unique value and outcome with success or failed. Report success only after the skill is installed and a minimal verification passes."},{"id":"cursor","label":"Cursor","kind":"agent-prompt","value":"Turn \"affinity-proteomics\" from https://github.com/ClawBio/ClawBio/tree/main/skills/affinity-proteomics into a reusable Cursor project rule or agent instruction. Preserve the core workflow, adapt paths to this repo, and keep the rule scoped to tasks where it is relevant. Skill purpose: Unified analysis pipeline for affinity-based proteomics platforms — Olink (PEA, NPX) and SomaLogic SomaScan (SOMAmer, After the install attempt, report the result to https://www.openagentskill.com/api/agent/outcome with POST JSON {\"event_id\":\"install_<unique-id>\",\"skill_slug\":\"clawbio-affinity-proteomics\",\"task\":\"Install affinity-proteomics\",\"agent\":\"cursor\",\"outcome\":\"success\",\"install_used\":true}. Replace event_id with a unique value and outcome with success or failed. Report success only after the skill is installed and a minimal verification passes."}]},"trust":{"score":75,"label":"Strong shortlist","version":"trust-score-v4","evidence":{"stars":"1.1K GitHub stars","repoActivity":"1.1K stars, 257 forks","lastPushed":"Pushed today","license":"MIT","repository":"https://github.com/ClawBio/ClawBio/tree/main/skills/affinity-proteomics","install":"npx skills add ClawBio/ClawBio --skill affinity-proteomics","installSafety":"standard package or runtime install path","permissionSurface":"shell or command execution, filesystem or document access","documentation":"Strong README/SKILL.md context","agentOutcomes":"No agent outcome data yet"}},"audit":{"score":81,"risk_level":"needs_review","risk_label":"Needs review","warnings":["Permission surface may require sandboxing","Financial research output is not financial advice; require human review before any live investment decision","The skill depends on the `somadata` package for SomaLogic ADAT parsing, which may not be available in all environments; installation instructions are provided but not guaranteed to work offline.","The SKILL.md excerpt is truncated in the review, but the provided content is comprehensive; the full script was not fully inspected for edge-case handling.","Financial research output is not financial advice; require human review before any live investment decision.","Quality score needs review","Permission surface needs review: shell or command execution, filesystem or document access","Permission surface: shell or command execution, filesystem or document access"]},"safety_gate":{"score":49,"tier":"experimental","label":"Experimental","auto_install_policy":"review","blocked":false,"permission_hints":[{"id":"shell","label":"Shell or command execution","reason":"Skill metadata references terminal, CLI, shell, subprocess, or command execution workflows.","severity":"high"},{"id":"network","label":"Network access","reason":"Skill likely fetches remote pages, APIs, repositories, or external services.","severity":"medium"},{"id":"filesystem","label":"Filesystem access","reason":"Skill may read or write project files, documents, generated artifacts, or local workspace state.","severity":"medium"},{"id":"database","label":"Database access","reason":"Skill may inspect schemas, query databases, or work with persistent stores.","severity":"medium"}],"policy_warnings":["High-risk permission hints: Shell or command execution","Permission surface may require sandboxing"]},"checks":[{"id":"task_fit","label":"Task fit","status":"pass","score":84,"required_for_auto_install":true,"detail":"Task wording matches this skill metadata.","evidence":["Evaluate affinity-proteomics before installing it in an AI agent workflow","automation","Research agents workflows; Claude Code teams; teams that value GitHub adoption signals"]},{"id":"install_path","label":"Install path","status":"pass","score":92,"required_for_auto_install":true,"detail":"Install handoff is available.","evidence":["npx skills add ClawBio/ClawBio --skill affinity-proteomics"]},{"id":"install_safety","label":"Install command safety","status":"pass","score":92,"required_for_auto_install":true,"detail":"standard package or runtime install path","evidence":["npx skills add ClawBio/ClawBio --skill affinity-proteomics"]},{"id":"trust_score","label":"Trust score","status":"warn","score":75,"required_for_auto_install":true,"detail":"Good trust signals with a few areas worth checking before rollout.","evidence":["Strong shortlist","1.1K GitHub stars","MIT"]},{"id":"audit_score","label":"Audit score","status":"warn","score":81,"required_for_auto_install":true,"detail":"Needs review","evidence":["Permission surface may require sandboxing"]},{"id":"agent_safety_gate","label":"Agent safety gate","status":"warn","score":49,"required_for_auto_install":true,"detail":"Sparse or mixed signals. Useful for discovery, but not for autonomous installation.","evidence":["Test manually in an isolated workspace and compare against safer alternatives.","High-risk permission hints: Shell or command execution"]},{"id":"readme_skillmd_completeness","label":"README/SKILL.md completeness","status":"pass","score":86,"required_for_auto_install":false,"detail":"Metadata includes enough usage and workflow context","evidence":["Strong README/SKILL.md context"]},{"id":"license_clarity","label":"License clarity","status":"pass","score":86,"required_for_auto_install":true,"detail":"MIT","evidence":["MIT"]},{"id":"recent_maintenance","label":"Recent maintenance","status":"pass","score":100,"required_for_auto_install":false,"detail":"Pushed today","evidence":["Pushed today"]},{"id":"permission_surface","label":"Permission surface","status":"fail","score":50,"required_for_auto_install":true,"detail":"shell or command execution, filesystem or document access","evidence":["Shell or command execution: high","Network access: medium","Filesystem access: medium"]},{"id":"alternatives","label":"Alternatives available","status":"pass","score":82,"required_for_auto_install":false,"detail":"Alternative skills are available for comparison.","evidence":["bytedance-ui-tars-desktop","harry0703-moneyprinterturbo","trycua-cua"]}],"blockers":["Permission surface: shell or command execution, filesystem or document access"],"warnings":["Trust score: Good trust signals with a few areas worth checking before rollout.","Audit score: Needs review","Agent safety gate: Sparse or mixed signals. Useful for discovery, but not for autonomous installation.","High-risk permission hints: Shell or command execution","Permission surface may require sandboxing","Financial research output is not financial advice; require human review before any live investment decision","The skill depends on the `somadata` package for SomaLogic ADAT parsing, which may not be available in all environments; installation instructions are provided but not guaranteed to work offline.","The SKILL.md excerpt is truncated in the review, but the provided content is comprehensive; the full script was not fully inspected for edge-case handling.","Financial research output is not financial advice; require human review before any live investment decision.","Quality score needs review","Permission surface needs review: shell or command execution, filesystem or document access","Permission surface: shell or command execution, filesystem or document access"],"validation_plan":["Inspect repository, README/SKILL.md, license, and recent commits before production use.","Install in an isolated workspace or sandbox with no production secrets available.","Run the smallest representative task and record files touched, commands run, network access, and outputs.","Compare the selected skill against at least one alternative when the eval status is review or failed.","Promote only after the agent reports a successful verification result and unresolved warnings are accepted."],"do_not_use_when":["teams that need a vendor-supported SLA","production agents without a repository review","The skill depends on the `somadata` package for SomaLogic ADAT parsing, which may not be available in all environments; installation instructions are provided but not guaranteed to work offline.","High-risk permission hints: Shell or command execution","Permission surface may require sandboxing","Financial research output is not financial advice; require human review before any live investment decision","The SKILL.md excerpt is truncated in the review, but the provided content is comprehensive; the full script was not fully inspected for edge-case handling.","Financial research output is not financial advice; require human review before any live investment decision."],"alternatives":[{"slug":"bytedance-ui-tars-desktop","name":"UI-TARS Desktop","url":"https://www.openagentskill.com/skills/bytedance-ui-tars-desktop","stars":36958,"install_command":"npx skills add bytedance/UI-TARS-desktop","trust_score":85,"audit_score":90},{"slug":"harry0703-moneyprinterturbo","name":"MoneyPrinterTurbo","url":"https://www.openagentskill.com/skills/harry0703-moneyprinterturbo","stars":88538,"install_command":"npx skills add harry0703/MoneyPrinterTurbo","trust_score":90,"audit_score":92},{"slug":"trycua-cua","name":"Cua","url":"https://www.openagentskill.com/skills/trycua-cua","stars":21387,"install_command":"npx skills add trycua/cua","trust_score":93,"audit_score":95}],"machine_metadata":{"version":"openagentskill-agent-metadata-v2","skill":{"slug":"clawbio-affinity-proteomics","name":"affinity-proteomics","description":"Unified analysis pipeline for affinity-based proteomics platforms — Olink (PEA, NPX) and SomaLogic SomaScan (SOMAmer,","category":"automation","url":"https://www.openagentskill.com/skills/clawbio-affinity-proteomics","repository":"https://github.com/ClawBio/ClawBio/tree/main/skills/affinity-proteomics","github_repo":"ClawBio/ClawBio"},"suited_tasks":["Research agents workflows","Claude Code teams","teams that value GitHub adoption signals","Search sources","Extract claims","Synthesize findings","Move data between tools","Transform files"],"suited_agents":["Codex","Claude Code","Cursor","OpenAgentSkill CLI","CLI"],"install":{"command":"npx skills add ClawBio/ClawBio --skill affinity-proteomics","ready":true,"targets":[{"id":"openagentskill-cli","label":"CLI","kind":"command","value":"npx --yes https://github.com/Leon-Drq/openagentskill/releases/download/cli-v0.2.1/openagentskill-0.2.1.tgz install clawbio-affinity-proteomics"},{"id":"codex","label":"Codex","kind":"agent-prompt","value":"Install the \"affinity-proteomics\" agent skill from https://github.com/ClawBio/ClawBio/tree/main/skills/affinity-proteomics. Read its SKILL.md or equivalent instructions first, install only the files needed for this workspace, and summarize any required setup before using it. Skill purpose: Unified analysis pipeline for affinity-based proteomics platforms — Olink (PEA, NPX) and SomaLogic SomaScan (SOMAmer, After the install attempt, report the result to https://www.openagentskill.com/api/agent/outcome with POST JSON {\"event_id\":\"install_<unique-id>\",\"skill_slug\":\"clawbio-affinity-proteomics\",\"task\":\"Install affinity-proteomics\",\"agent\":\"codex\",\"outcome\":\"success\",\"install_used\":true}. Replace event_id with a unique value and outcome with success or failed. Report success only after the skill is installed and a minimal verification passes."},{"id":"claude-code","label":"Claude Code","kind":"agent-prompt","value":"Add \"affinity-proteomics\" as a Claude Code skill from https://github.com/ClawBio/ClawBio/tree/main/skills/affinity-proteomics. Inspect the skill instructions, place the reusable skill files in the appropriate local skills location for this project, and report the activation steps. Skill purpose: Unified analysis pipeline for affinity-based proteomics platforms — Olink (PEA, NPX) and SomaLogic SomaScan (SOMAmer, After the install attempt, report the result to https://www.openagentskill.com/api/agent/outcome with POST JSON {\"event_id\":\"install_<unique-id>\",\"skill_slug\":\"clawbio-affinity-proteomics\",\"task\":\"Install affinity-proteomics\",\"agent\":\"claude-code\",\"outcome\":\"success\",\"install_used\":true}. Replace event_id with a unique value and outcome with success or failed. Report success only after the skill is installed and a minimal verification passes."},{"id":"cursor","label":"Cursor","kind":"agent-prompt","value":"Turn \"affinity-proteomics\" from https://github.com/ClawBio/ClawBio/tree/main/skills/affinity-proteomics into a reusable Cursor project rule or agent instruction. Preserve the core workflow, adapt paths to this repo, and keep the rule scoped to tasks where it is relevant. Skill purpose: Unified analysis pipeline for affinity-based proteomics platforms — Olink (PEA, NPX) and SomaLogic SomaScan (SOMAmer, After the install attempt, report the result to https://www.openagentskill.com/api/agent/outcome with POST JSON {\"event_id\":\"install_<unique-id>\",\"skill_slug\":\"clawbio-affinity-proteomics\",\"task\":\"Install affinity-proteomics\",\"agent\":\"cursor\",\"outcome\":\"success\",\"install_used\":true}. Replace event_id with a unique value and outcome with success or failed. Report success only after the skill is installed and a minimal verification passes."}],"handoff_url":"https://www.openagentskill.com/api/skills/clawbio-affinity-proteomics/install","manifest_url":"https://www.openagentskill.com/api/registry/manifest/clawbio-affinity-proteomics"},"trust":{"score":75,"label":"Strong shortlist","version":"trust-score-v4","install_policy":"human_review_before_install","evidence":{"stars":"1.1K GitHub stars","repoActivity":"1.1K stars, 257 forks","lastPushed":"Pushed today","license":"MIT","repository":"https://github.com/ClawBio/ClawBio/tree/main/skills/affinity-proteomics","install":"npx skills add ClawBio/ClawBio --skill affinity-proteomics","installSafety":"standard package or runtime install path","permissionSurface":"shell or command execution, filesystem or document access","documentation":"Strong README/SKILL.md context","agentOutcomes":"No agent outcome data yet"},"outcome_evidence":{"total":0,"successes":0,"failures":0,"not_relevant":0,"success_rate":null,"recent_success_rate":null,"recent_failure_rate":null,"install_attempts":0,"install_success_rate":null,"risk_blocked":0,"setup_required":0,"avg_output_quality":null,"production_outcomes":0,"last_outcome_at":null,"label":"No agent outcome data yet"},"auto_install":{"allowed":false,"sandbox_required":true,"reason":"Human review or sandbox validation is required before automatic installation."},"best_for":["automation","agent-skill"],"known_risks":["The skill depends on the `somadata` package for SomaLogic ADAT parsing, which may not be available in all environments; installation instructions are provided but not guaranteed to work offline.","Financial research output is not financial advice; require human review before any live investment decision.","Quality score needs review","Permission surface needs review: shell or command execution, filesystem or document access","Permission surface: shell or command execution, filesystem or document access"]},"agent_proven":{"version":"agent-proven-v1","score":0,"tier":"unproven","label":"Needs first agent run","summary":"No agent outcome reports yet. Use Resolve, run one narrow sandbox task, then report the result.","metrics":{"totalOutcomes":0,"successfulOutcomes":0,"failedOutcomes":0,"installAttempts":0,"installSuccessRate":null,"successRate":null,"recentSuccessRate":null,"recentFailureRate":null,"riskBlocked":0,"setupRequired":0,"notRelevant":0,"avgOutputQuality":null,"avgTimeToUsefulMs":null,"productionOutcomes":0,"humanReviewRequired":0,"uniqueAgents":0,"lastOutcomeAt":null},"signals":[],"penalties":["No real agent outcome evidence yet"]},"audit":{"score":81,"risk_level":"needs_review","risk_label":"Needs review","warnings":["Permission surface may require sandboxing","Financial research output is not financial advice; require human review before any live investment decision","The skill depends on the `somadata` package for SomaLogic ADAT parsing, which may not be available in all environments; installation instructions are provided but not guaranteed to work offline.","The SKILL.md excerpt is truncated in the review, but the provided content is comprehensive; the full script was not fully inspected for edge-case handling.","Financial research output is not financial advice; require human review before any live investment decision.","Quality score needs review","Permission surface needs review: shell or command execution, filesystem or document access","Permission surface: shell or command execution, filesystem or document access"]},"safety_gate":{"tier":"experimental","label":"Experimental","auto_install_policy":"review","auto_install_allowed":false,"human_review_required":true,"blocked":false,"recommended_action":"Test manually in an isolated workspace and compare against safer alternatives."},"quality":{"score":77,"label":"Strong"},"supply":{"track":"Research and knowledge work","scenario":"Research agents","maintenance":"Pushed today","risk":"Needs review"},"alternative_skills":[{"slug":"bytedance-ui-tars-desktop","name":"UI-TARS Desktop","url":"https://www.openagentskill.com/skills/bytedance-ui-tars-desktop","stars":36958,"install_command":"npx skills add bytedance/UI-TARS-desktop","trust_score":85,"audit_score":90},{"slug":"harry0703-moneyprinterturbo","name":"MoneyPrinterTurbo","url":"https://www.openagentskill.com/skills/harry0703-moneyprinterturbo","stars":88538,"install_command":"npx skills add harry0703/MoneyPrinterTurbo","trust_score":90,"audit_score":92},{"slug":"trycua-cua","name":"Cua","url":"https://www.openagentskill.com/skills/trycua-cua","stars":21387,"install_command":"npx skills add trycua/cua","trust_score":93,"audit_score":95}],"do_not_use_when":["teams that need a vendor-supported SLA","production agents without a repository review","The skill depends on the `somadata` package for SomaLogic ADAT parsing, which may not be available in all environments; installation instructions are provided but not guaranteed to work offline.","High-risk permission hints: Shell or command execution","Permission surface may require sandboxing","Financial research output is not financial advice; require human review before any live investment decision","The SKILL.md excerpt is truncated in the review, but the provided content is comprehensive; the full script was not fully inspected for edge-case handling.","Financial research output is not financial advice; require human review before any live investment decision."],"agent_contract":{"task_input":"Evaluate affinity-proteomics before installing it in an AI agent workflow","recommended_action":"Test manually in an isolated workspace and compare against safer alternatives.","install_policy":"review","minimum_review_before_use":["Trust: 75/100 Strong shortlist","Audit: 81/100 Needs review","Safety: 49/100 Avoid automatic install","Review repository, license, install command, and permission surface before production use."],"expected_agent_output":{"selected_skill":"clawbio-affinity-proteomics (affinity-proteomics)","install_command":"npx skills add ClawBio/ClawBio --skill affinity-proteomics","risk_summary":"Needs review; Experimental; Review before production","verification_result":"Report the smallest successful task, files touched, warnings, and any missing setup."}},"outcome_feedback":{"endpoint":"https://www.openagentskill.com/api/agent/outcome","method":"POST","requires_resolve_event_id":true,"event_id_source":"Use install_receipt.outcome_feedback.event_id or feedback.event_id returned by /api/agent/resolve for the current task.","expected_outcomes":["success","failed","not_relevant","blocked_by_risk","setup_required"],"payload_template":{"event_id":"<install_receipt.outcome_feedback.event_id or feedback.event_id from /api/agent/resolve>","skill_slug":"clawbio-affinity-proteomics","task":"Evaluate affinity-proteomics before installing it in an AI agent workflow","agent":"codex","outcome":"success","install_used":true,"risk_blocked":false,"setup_required":false,"task_success":true,"output_quality":4,"error_type":null,"human_review_required":false,"workspace":"sandbox","time_to_useful_ms":120000,"notes":"Report the smallest successful task, setup friction, files touched, and risk notes."}},"endpoints":{"web":"https://www.openagentskill.com/skills/clawbio-affinity-proteomics","api":"https://www.openagentskill.com/api/agent/skills/clawbio-affinity-proteomics","audit":"https://www.openagentskill.com/skills/clawbio-affinity-proteomics/audit","eval":"https://www.openagentskill.com/api/agent/evals?slug=clawbio-affinity-proteomics&task=Evaluate%20affinity-proteomics%20before%20installing%20it%20in%20an%20AI%20agent%20workflow&max_risk=medium","resolve":"https://www.openagentskill.com/api/agent/resolve?task=Evaluate%20affinity-proteomics%20before%20installing%20it%20in%20an%20AI%20agent%20workflow&agent=codex&max_risk=medium","receipt":"https://www.openagentskill.com/api/agent/receipt?task=Evaluate%20affinity-proteomics%20before%20installing%20it%20in%20an%20AI%20agent%20workflow&agent=codex&max_risk=medium&format=text","install":"https://www.openagentskill.com/api/skills/clawbio-affinity-proteomics/install","manifest":"https://www.openagentskill.com/api/registry/manifest/clawbio-affinity-proteomics"}},"endpoints":{"web":"https://www.openagentskill.com/skills/clawbio-affinity-proteomics","api":"https://www.openagentskill.com/api/agent/skills/clawbio-affinity-proteomics","eval":"https://www.openagentskill.com/api/agent/evals?slug=clawbio-affinity-proteomics","audit":"https://www.openagentskill.com/skills/clawbio-affinity-proteomics/audit","resolve":"https://www.openagentskill.com/api/agent/resolve?task=Evaluate%20affinity-proteomics%20before%20installing%20it%20in%20an%20AI%20agent%20workflow&agent=codex&max_risk=medium"}},"meta":{"endpoint":"/api/agent/evals","mode":"skill_eval","purpose":"Pre-install eval contract for a single skill. Agents should read this before installing a reusable skill.","generated_at":"2026-08-23T20:30:01.124Z"}}